Information for 8-STCACACAGTRCCATA (Motif 9)

A T G C A C G T A T G C G T C A A T G C C G T A A G T C C G T A A C T G A C G T C T A G A T G C A G T C C G T A C G A T C T G A
Reverse Opposite:
A G C T C G T A A C G T A C T G A T C G A G T C G T C A A G T C C G A T A C T G A C G T A T C G A C G T A T C G C G T A A T C G
p-value:1e-11
log p-value:-2.681e+01
Information Content per bp:1.903
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.7 +/- 13.6bp
Average Position of motif in Background47.7 +/- 31.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:1
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:STCACACAGTRCCATA-
-TGACCCAGTGACCTAC
 A T G C A C G T A T G C G T C A A T G C C G T A A G T C C G T A A C T G A C G T C T A G A T G C A G T C C G T A C G A T C T G A A C G T
A C G T G C A T T A C G G C T A A T G C G T A C A G T C T G C A T A C G C G A T C A T G T G C A T G A C G A T C G A C T T C G A T A G C

PB0050.1_Osr1_1/Jaspar

Match Rank:2
Score:0.53
Offset:1
Orientation:forward strand
Alignment:STCACACAGTRCCATA-
-ATTTACAGTAGCAAAA
 A T G C A C G T A T G C G T C A A T G C C G T A A G T C C G T A A C T G A C G T C T A G A T G C A G T C C G T A C G A T C T G A A C G T
A C G T G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A

PB0051.1_Osr2_1/Jaspar

Match Rank:3
Score:0.53
Offset:1
Orientation:forward strand
Alignment:STCACACAGTRCCATA-
-ATGTACAGTAGCAAAG
 A T G C A C G T A T G C G T C A A T G C C G T A A G T C C G T A A C T G A C G T C T A G A T G C A G T C C G T A C G A T C T G A A C G T
A C G T G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G

MGA/MA0801.1/Jaspar

Match Rank:4
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:STCACACAGTRCCATA
-TCACACCT-------
 A T G C A C G T A T G C G T C A A T G C C G T A A G T C C G T A A C T G A C G T C T A G A T G C A G T C C G T A C G A T C T G A
A C G T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer

Match Rank:5
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:STCACACAGTRCCATA
GHWACAWTGTWDCWA-
 A T G C A C G T A T G C G T C A A T G C C G T A A G T C C G T A A C T G A C G T C T A G A T G C A G T C C G T A C G A T C T G A
C T A G G C T A G C A T G C T A G A T C G C T A G C T A C G A T C T A G G C A T C G T A C G A T G A T C G C T A C G T A A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:STCACACAGTRCCATA
----CACAGN------
 A T G C A C G T A T G C G T C A A T G C C G T A A G T C C G T A A C T G A C G T C T A G A T G C A G T C C G T A C G A T C T G A
A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:7
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:STCACACAGTRCCATA
---ACAAAGGNBCCT-
 A T G C A C G T A T G C G T C A A T G C C G T A A G T C C G T A A C T G A C G T C T A G A T G C A G T C C G T A C G A T C T G A
A C G T A C G T A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T A C G T

DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer

Match Rank:8
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:STCACACAGTRCCATA
GHTACAWTGTADCHR-
 A T G C A C G T A T G C G T C A A T G C C G T A A G T C C G T A A C T G A C G T C T A G A T G C A G T C C G T A C G A T C T G A
C T A G G T C A G C A T C G T A A T G C G C T A C G T A C G A T T C A G G C A T C G T A C G A T G T A C G C T A C T G A A C G T

TBX1/MA0805.1/Jaspar

Match Rank:9
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:STCACACAGTRCCATA
-TCACACCT-------
 A T G C A C G T A T G C G T C A A T G C C G T A A G T C C G T A A C T G A C G T C T A G A T G C A G T C C G T A C G A T C T G A
A C G T A C G T T G A C C T G A A T G C T C G A A G T C A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:10
Score:0.51
Offset:1
Orientation:forward strand
Alignment:STCACACAGTRCCATA
-TGGCACCATGCCAA-
 A T G C A C G T A T G C G T C A A T G C C G T A A G T C C G T A A C T G A C G T C T A G A T G C A G T C C G T A C G A T C T G A
A C G T A C G T A C T G A C T G A G T C G C T A T A G C A T G C C T G A G C A T A C T G A G T C A G T C C G T A C G T A A C G T