Information for 24-RYTTTTTAAAAAA (Motif 27)

T C G A G A C T A C G T A G C T A C G T A C G T A C G T C G T A C G T A C G T A C G T A C T G A C G T A
Reverse Opposite:
A C G T A G C T A C G T A C G T A C G T C G A T C G T A C G T A C G T A C T G A C G T A C T G A A G C T
p-value:1e-8
log p-value:-1.905e+01
Information Content per bp:1.875
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets48.8 +/- 18.3bp
Average Position of motif in Background45.7 +/- 22.9bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0187.1_Tcf7_2/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-RYTTTTTAAAAAA-
NNNTTTNTAATACNG
 A C G T T C G A G A C T A C G T A G C T A C G T A C G T A C G T C G T A C G T A C G T A C G T A C T G A C G T A A C G T
C G A T C A G T C T A G C A G T C A G T C G A T T G C A A G C T G T C A C G T A C G A T C G T A G T A C T C A G C A T G

LIN54/MA0619.1/Jaspar

Match Rank:2
Score:0.62
Offset:3
Orientation:forward strand
Alignment:RYTTTTTAAAAAA
---ATTTGAATT-
 T C G A G A C T A C G T A G C T A C G T A C G T A C G T C G T A C G T A C G T A C G T A C T G A C G T A
A C G T A C G T A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T

PB0129.1_Glis2_2/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:forward strand
Alignment:RYTTTTTAAAAAA--
-AATATTAATAAAGA
 T C G A G A C T A C G T A G C T A C G T A C G T A C G T C G T A C G T A C G T A C G T A C T G A C G T A A C G T A C G T
A C G T G C T A C G T A A C G T C T G A C G A T C A G T C T G A G C T A G C A T G C T A C G T A G T C A C T A G T C G A

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:4
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:RYTTTTTAAAAAA-
----TTTGAAACCG
 T C G A G A C T A C G T A G C T A C G T A C G T A C G T C G T A C G T A C G T A C G T A C T G A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

PB0182.1_Srf_2/Jaspar

Match Rank:5
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----RYTTTTTAAAAAA
NNNNTTTTTTTTTNAAC-
 A C G T A C G T A C G T A C G T A C G T T C G A G A C T A C G T A G C T A C G T A C G T A C G T C G T A C G T A C G T A C G T A C T G A C G T A
C G A T C G T A T C G A A C G T C A G T C A G T C A G T C G A T A C G T A C G T A C G T G A C T G A C T G C A T G C T A T G C A A T G C A C G T

PB0080.1_Tbp_1/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:RYTTTTTAAAAAA---
TCTTTATATATAAATA
 T C G A G A C T A C G T A G C T A C G T A C G T A C G T C G T A C G T A C G T A C G T A C T G A C G T A A C G T A C G T A C G T
A G C T A G T C G C A T C G A T G C A T C G T A G C A T C G T A C G A T C G T A C G A T C G T A G C T A G T C A C A G T T C G A

PB0001.1_Arid3a_1/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:RYTTTTTAAAAAA----
NNNTTTTAATTAANNNN
 T C G A G A C T A C G T A G C T A C G T A C G T A C G T C G T A C G T A C G T A C G T A C T G A C G T A A C G T A C G T A C G T A C G T
C T A G C G T A C G T A C A G T G C A T G A C T A G C T C T G A C G T A C G A T G A C T T C G A C T G A C G T A T G A C T A G C A T G C

PB0116.1_Elf3_2/Jaspar

Match Rank:8
Score:0.56
Offset:2
Orientation:forward strand
Alignment:RYTTTTTAAAAAA------
--GTTCAAAAAAAAAATTC
 T C G A G A C T A C G T A G C T A C G T A C G T A C G T C G T A C G T A C G T A C G T A C T G A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G A G C T A C G T G T A C G T C A C G T A G C T A G C T A G C T A G C T A G C T A G C T A G C T A G T C A G A C T C G A T G A T C

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:RYTTTTTAAAAAA
-NTGTTTAYATWW
 T C G A G A C T A C G T A G C T A C G T A C G T A C G T C G T A C G T A C G T A C G T A C T G A C G T A
A C G T C A G T A C G T C T A G A C G T A C G T A C G T C G T A A G C T T G C A G A C T C G T A C G T A

PH0100.1_Lmx1a/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:RYTTTTTAAAAAA----
NNTTTTTAATTAATTCG
 T C G A G A C T A C G T A G C T A C G T A C G T A C G T C G T A C G T A C G T A C G T A C T G A C G T A A C G T A C G T A C G T A C G T
C T A G C T A G C G A T C G A T G C A T G A C T G A C T C G T A C G T A C G A T C G A T C T G A C T G A C G A T C G A T A T G C A T C G