Information for 3-TTTGCTGCCACCT (Motif 2)

C A G T A G C T A G C T A C T G A T G C C G A T A C T G A G T C A G T C G C T A A T G C T A G C A G C T
Reverse Opposite:
C T G A A T C G T A C G C G A T C T A G C T A G G T A C C G T A A T C G G T A C C T G A C T G A G T C A
p-value:1e-25
log p-value:-5.866e+01
Information Content per bp:1.690
Number of Target Sequences with motif41.0
Percentage of Target Sequences with motif5.12%
Number of Background Sequences with motif263.1
Percentage of Background Sequences with motif0.55%
Average Position of motif in Targets43.0 +/- 24.0bp
Average Position of motif in Background49.8 +/- 27.0bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:1
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TTTGCTGCCACCT
CTGTCTGTCACCT
 C A G T A G C T A G C T A C T G A T G C C G A T A C T G A G T C A G T C G C T A A T G C T A G C A G C T
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

PB0154.1_Osr1_2/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TTTGCTGCCACCT--
ACATGCTACCTAATAC
 A C G T C A G T A G C T A G C T A C T G A T G C C G A T A C T G A G T C A G T C G C T A A T G C T A G C A G C T A C G T A C G T
C T G A G A T C G C T A G A C T T C A G G A T C A G C T C G T A G T A C G A T C G C A T T C G A G T C A C G A T G T C A T G A C

PB0155.1_Osr2_2/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TTTGCTGCCACCT--
ACTTGCTACCTACACC
 A C G T C A G T A G C T A G C T A C T G A T G C C G A T A C T G A G T C A G T C G C T A A T G C T A G C A G C T A C G T A C G T
C T G A G A T C G A C T G A C T T A C G A G T C G A C T G C T A G T A C G A T C G C A T T C G A G T A C C G T A A G C T T G A C

POL008.1_DCE_S_I/Jaspar

Match Rank:4
Score:0.60
Offset:3
Orientation:forward strand
Alignment:TTTGCTGCCACCT
---GCTTCC----
 C A G T A G C T A G C T A C T G A T G C C G A T A C T G A G T C A G T C G C T A A T G C T A G C A G C T
A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:TTTGCTGCCACCT
-----TGACACCT
 C A G T A G C T A G C T A C T G A T G C C G A T A C T G A G T C A G T C G C T A A T G C T A G C A G C T
A C G T A C G T A C G T A C G T A C G T G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TTTGCTGCCACCT
-TGTCTGDCACCT
 C A G T A G C T A G C T A C T G A T G C C G A T A C T G A G T C A G T C G C T A A T G C T A G C A G C T
A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

NRL/MA0842.1/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TTTGCTGCCACCT
AATTTGCTGAC----
 A C G T A C G T C A G T A G C T A G C T A C T G A T G C C G A T A C T G A G T C A G T C G C T A A T G C T A G C A G C T
C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C A C G T A C G T A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:8
Score:0.58
Offset:2
Orientation:forward strand
Alignment:TTTGCTGCCACCT
--TGCTGACTCA-
 C A G T A G C T A G C T A C T G A T G C C G A T A C T G A G T C A G T C G C T A A T G C T A G C A G C T
A C G T A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A A C G T

YY1(Zf)/Promoter/Homer

Match Rank:9
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TTTGCTGCCACCT--
---GCCGCCATCTTG
 C A G T A G C T A G C T A C T G A T G C C G A T A C T G A G T C A G T C G C T A A T G C T A G C A G C T A C G T A C G T
A C G T A C G T A C G T C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G

ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer

Match Rank:10
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:TTTGCTGCCACCT
---ACTTCCTBGT
 C A G T A G C T A G C T A C T G A T G C C G A T A C T G A G T C A G T C G C T A A T G C T A G C A G C T
A C G T A C G T A C G T T C G A A G T C A G C T C G A T A G T C A T G C A C G T A T G C T C A G C G A T