Information for 5-AGTTACAGGAGARACC (Motif 12)

C G T A A C T G A C G T G A C T G C T A A T G C C G T A A C T G C T A G C T G A A C T G C G T A C T A G G C T A A G T C A G T C
Reverse Opposite:
C T A G T A C G C A G T A G T C C G A T A G T C A G C T A G T C G T A C C G A T A T C G C A G T C T G A G T C A G T A C C G A T
p-value:1e-8
log p-value:-2.052e+01
Information Content per bp:1.729
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif6.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.3 +/- 28.3bp
Average Position of motif in Background57.9 +/- 19.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:1
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:AGTTACAGGAGARACC
-TTTCCTGGAAAGNNN
 C G T A A C T G A C G T G A C T G C T A A T G C C G T A A C T G C T A G C T G A A C T G C G T A C T A G G C T A A G T C A G T C
A C G T G A C T A G C T A G C T G A T C G A T C G C A T C T A G T C A G T C G A T C G A C T G A C T A G A G T C G C T A C T G A

STAT1/MA0137.3/Jaspar

Match Rank:2
Score:0.53
Offset:1
Orientation:forward strand
Alignment:AGTTACAGGAGARACC
-TTTCCAGGAAA----
 C G T A A C T G A C G T G A C T G C T A A T G C C G T A A C T G C T A G C T G A A C T G C G T A C T A G G C T A A G T C A G T C
A C G T A C G T A G C T A C G T T G A C G A T C C T G A C T A G C A T G C T G A G T C A C T G A A C G T A C G T A C G T A C G T

ZEB1/MA0103.2/Jaspar

Match Rank:3
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:AGTTACAGGAGARACC
-----CAGGTGAGG--
 C G T A A C T G A C G T G A C T G C T A A T G C C G T A A C T G C T A G C T G A A C T G C G T A C T A G G C T A A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A C T G A C G T C T A G G C T A C T A G A C T G A C G T A C G T

PB0203.1_Zfp691_2/Jaspar

Match Rank:4
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:AGTTACAGGAGARACC--
-NTNNNAGGAGTCTCNTN
 C G T A A C T G A C G T G A C T G C T A A T G C C G T A A C T G C T A G C T G A A C T G C G T A C T A G G C T A A G T C A G T C A C G T A C G T
A C G T A T C G C A G T A C G T G C T A C T A G C T G A A C T G A C T G C G T A A T C G A G C T G T A C G C A T T G A C T A C G G A C T G T C A

STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer

Match Rank:5
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-AGTTACAGGAGARACC
NATTTCCNGGAAAT---
 A C G T C G T A A C T G A C G T G A C T G C T A A T G C C G T A A C T G C T A G C T G A A C T G C G T A C T A G G C T A A G T C A G T C
A T G C C T G A G A C T A C G T A C G T G T A C G A T C C G A T C T A G C A T G C G T A C G T A C T G A G A C T A C G T A C G T A C G T

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:6
Score:0.50
Offset:0
Orientation:forward strand
Alignment:AGTTACAGGAGARACC
NTTTCCNGGAAA----
 C G T A A C T G A C G T G A C T G C T A A T G C C G T A A C T G C T A G C T G A A C T G C G T A C T A G G C T A A G T C A G T C
T C A G A G C T A C G T A C G T G T A C G A T C C G T A C T A G C A T G G T C A C G T A T C G A A C G T A C G T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:7
Score:0.50
Offset:6
Orientation:reverse strand
Alignment:AGTTACAGGAGARACC
------NGAAGC----
 C G T A A C T G A C G T G A C T G C T A A T G C C G T A A C T G C T A G C T G A A C T G C G T A C T A G G C T A A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:8
Score:0.50
Offset:5
Orientation:reverse strand
Alignment:AGTTACAGGAGARACC
-----CTYRAGTGSY-
 C G T A A C T G A C G T G A C T G C T A A T G C C G T A A C T G C T A G C T G A A C T G C G T A C T A G G C T A A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C A C G T

Bcl6/MA0463.1/Jaspar

Match Rank:9
Score:0.50
Offset:1
Orientation:forward strand
Alignment:AGTTACAGGAGARACC
-TTTCCTAGAAAGCA-
 C G T A A C T G A C G T G A C T G C T A A T G C C G T A A C T G C T A G C T G A A C T G C G T A C T A G G C T A A G T C A G T C
A C G T C A G T C G A T A G C T G T A C A G T C A C G T T C G A C T A G C T G A T C G A C T G A C A T G G T A C G C T A A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.49
Offset:3
Orientation:reverse strand
Alignment:AGTTACAGGAGARACC
---NNCAGGTGNN---
 C G T A A C T G A C G T G A C T G C T A A T G C C G T A A C T G C T A G C T G A A C T G C G T A C T A G G C T A A G T C A G T C
A C G T A C G T A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T A C G T A C G T