Information for 9-TTGTGGCCACAAG (Motif 11)

G A C T C A G T C T A G A C G T T A C G C A T G G T A C A G T C C G T A G A T C G C T A C G T A A C T G
Reverse Opposite:
T G A C C G A T C G A T C T A G C G A T T A C G A C T G G A T C A T G C G T C A G A T C G T C A C T G A
p-value:1e-9
log p-value:-2.173e+01
Information Content per bp:1.650
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.00%
Number of Background Sequences with motif119.2
Percentage of Background Sequences with motif0.25%
Average Position of motif in Targets57.9 +/- 23.0bp
Average Position of motif in Background51.3 +/- 27.6bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0104.1_Zscan4_1/Jaspar

Match Rank:1
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TTGTGGCCACAAG-
TACATGTGCACATAAAA
 A C G T A C G T A C G T G A C T C A G T C T A G A C G T T A C G C A T G G T A C A G T C C G T A G A T C G C T A C G T A A C T G A C G T
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

PB0026.1_Gm397_1/Jaspar

Match Rank:2
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TTGTGGCCACAAG-
CAGATGTGCACATACGT
 A C G T A C G T A C G T G A C T C A G T C T A G A C G T T A C G C A T G G T A C A G T C C G T A G A T C G C T A C G T A A C T G A C G T
G T A C G C T A C A T G C G T A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A A G C T G T C A G T A C C A T G G A C T

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:3
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:TTGTGGCCACAAG--
-----GTCACATGAY
 G A C T C A G T C T A G A C G T T A C G C A T G G T A C A G T C C G T A G A T C G C T A C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:TTGTGGCCACAAG----------
---TGGCCACCAGGTGGCACTNT
 G A C T C A G T C T A G A C G T T A C G C A T G G T A C A G T C C G T A G A T C G C T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TTGTGGCCACAAG
NNHTGTGGTTWN---
 A C G T A C G T G A C T C A G T C T A G A C G T T A C G C A T G G T A C A G T C C G T A G A T C G C T A C G T A A C T G
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T A C G T A C G T

CTCF/MA0139.1/Jaspar

Match Rank:6
Score:0.54
Offset:3
Orientation:forward strand
Alignment:TTGTGGCCACAAG---------
---TGGCCACCAGGGGGCGCTA
 G A C T C A G T C T A G A C G T T A C G C A T G G T A C A G T C C G T A G A T C G C T A C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

PB0133.1_Hic1_2/Jaspar

Match Rank:7
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--TTGTGGCCACAAG-
GGGTGTGCCCAAAAGG
 A C G T A C G T G A C T C A G T C T A G A C G T T A C G C A T G G T A C A G T C C G T A G A T C G C T A C G T A A C T G A C G T
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----TTGTGGCCACAAG
NNNVCTGWGYAAACASN
 A C G T A C G T A C G T A C G T G A C T C A G T C T A G A C G T T A C G C A T G G T A C A G T C C G T A G A T C G C T A C G T A A C T G
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.53
Offset:0
Orientation:forward strand
Alignment:TTGTGGCCACAAG--
ARGAGGMCAAAATGW
 G A C T C A G T C T A G A C G T T A C G C A T G G T A C A G T C C G T A G A T C G C T A C G T A A C T G A C G T A C G T
T G C A C T A G C T A G C T G A C A T G A C T G T G C A G A T C G T C A T G C A G T C A G T C A A G C T C T A G G C A T

USF2/MA0526.1/Jaspar

Match Rank:10
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:TTGTGGCCACAAG--
----GGTCACATGAC
 G A C T C A G T C T A G A C G T T A C G C A T G G T A C A G T C C G T A G A T C G C T A C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T C T A G T C A G A G C T A G T C C G T A A G T C T C G A A C G T A C T G T C G A A G T C