Information for 7-GAGGAGAAACTGCAGG (Motif 9)

A T C G C G T A A C T G A T C G C T G A A C T G C G T A C T G A G T C A A G T C A G C T T C A G A G T C C G T A C T A G T C A G
Reverse Opposite:
A G T C A G T C A C G T C T A G A G T C C T G A T A C G A C G T A G C T A C G T A G T C G A C T A T G C A G T C A C G T A T G C
p-value:1e-10
log p-value:-2.505e+01
Information Content per bp:1.764
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets28.6 +/- 22.5bp
Average Position of motif in Background53.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0146.1_Mafk_2/Jaspar

Match Rank:1
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GAGGAGAAACTGCAGG-
--GAAAAAATTGCAAGG
 A T C G C G T A A C T G A T C G C T G A A C T G C G T A C T G A G T C A A G T C A G C T T C A G A G T C C G T A C T A G T C A G A C G T
A C G T A C G T T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:2
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GAGGAGAAACTGCAGG
GGAAGTGAAAST-----
 A C G T A T C G C G T A A C T G A T C G C T G A A C T G C G T A C T G A G T C A A G T C A G C T T C A G A G T C C G T A C T A G T C A G
C T A G C T A G C G T A C G T A T A C G C G A T C T A G C T G A C T G A C G T A T A C G G A C T A C G T A C G T A C G T A C G T A C G T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:3
Score:0.55
Offset:5
Orientation:forward strand
Alignment:GAGGAGAAACTGCAGG-
-----GAAAGTGAAAGT
 A T C G C G T A A C T G A T C G C T G A A C T G C G T A C T G A G T C A A G T C A G C T T C A G A G T C C G T A C T A G T C A G A C G T
A C G T A C G T A C G T A C G T A C G T T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:4
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GAGGAGAAACTGCAGG
CANAGNNCAAAGTCCA--
 A C G T A C G T A T C G C G T A A C T G A T C G C T G A A C T G C G T A C T G A G T C A A G T C A G C T T C A G A G T C C G T A C T A G T C A G
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A A C G T A C G T

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:5
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GAGGAGAAACTGCAGG
GRAASTGAAAST-----
 A C G T A T C G C G T A A C T G A T C G C T G A A C T G C G T A C T G A G T C A A G T C A G C T T C A G A G T C C G T A C T A G T C A G
T C A G T C A G G C T A C G T A T A C G G A C T T C A G T C G A C T G A C G T A T A C G G A C T A C G T A C G T A C G T A C G T A C G T

IRF1/MA0050.2/Jaspar

Match Rank:6
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GAGGAGAAACTGCAGG-----
AAANNGAAAGTGAAAGTAAAN
 A T C G C G T A A C T G A T C G C T G A A C T G C G T A C T G A G T C A A G T C A G C T T C A G A G T C C G T A C T A G T C A G A C G T A C G T A C G T A C G T A C G T
C T G A C G T A C T G A T C A G G C A T T C A G C T G A C T G A C G T A T A C G G A C T C T A G T C G A C T G A C G T A T A C G G A C T T C G A T C G A C T G A C T G A

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GAGGAGAAACTGCAGG
GAAAGTGAAAGT-----
 A C G T A T C G C G T A A C T G A T C G C T G A A C T G C G T A C T G A G T C A A G T C A G C T T C A G A G T C C G T A C T A G T C A G
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T A C G T A C G T A C G T A C G T

SPIB/MA0081.1/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GAGGAGAAACTGCAGG
-AGAGGAA--------
 A T C G C G T A A C T G A T C G C T G A A C T G C G T A C T G A G T C A A G T C A G C T T C A G A G T C C G T A C T A G T C A G
A C G T C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Hnf4a/MA0114.3/Jaspar

Match Rank:9
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GAGGAGAAACTGCAGG
GGGGTCAAAGTCCAAT
 A T C G C G T A A C T G A T C G C T G A A C T G C G T A C T G A G T C A A G T C A G C T T C A G A G T C C G T A C T A G T C A G
T C A G T C A G C T A G C A T G C A G T A G T C T C G A C T G A C T G A A C T G A C G T A G T C A G T C C T G A T C G A G A C T

HNF4G/MA0484.1/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GAGGAGAAACTGCAGG
AGAGTCCAAAGTCCA--
 A C G T A T C G C G T A A C T G A T C G C T G A A C T G C G T A C T G A G T C A A G T C A G C T T C A G A G T C C G T A C T A G T C A G
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A A C G T A C G T