Information for 8-TVTRGTGCCTTYTAAG (Motif 13)

A G C T T G C A A G C T C T A G T A C G A C G T A C T G A T G C A G T C A G C T A G C T A G C T A G C T T C G A C G T A A T C G
Reverse Opposite:
A T G C C G A T A C G T C T G A C T G A C T G A C T G A C T A G A T C G G T A C C G T A A G T C A G T C C T G A A C G T C T G A
p-value:1e-9
log p-value:-2.158e+01
Information Content per bp:1.693
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif15.7
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets52.8 +/- 13.0bp
Average Position of motif in Background37.4 +/- 18.2bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e1/MA0676.1/Jaspar

Match Rank:1
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:TVTRGTGCCTTYTAAG
----TTGACTTTT---
 A G C T T G C A A G C T C T A G T A C G A C G T A C T G A T G C A G T C A G C T A G C T A G C T A G C T T C G A C G T A A T C G
A C G T A C G T A C G T A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T A C G T A C G T A C G T

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:2
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:TVTRGTGCCTTYTAAG
---ACTTCCTGNT---
 A G C T T G C A A G C T C T A G T A C G A C G T A C T G A T G C A G T C A G C T A G C T A G C T A G C T T C G A C G T A A T C G
A C G T A C G T A C G T C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A C T G G C A T A C G T A C G T A C G T

ZNF143/MA0088.2/Jaspar

Match Rank:3
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:TVTRGTGCCTTYTAAG--
--CAATGCATTGTGGGTA
 A G C T T G C A A G C T C T A G T A C G A C G T A C T G A T G C A G T C A G C T A G C T A G C T A G C T T C G A C G T A A T C G A C G T A C G T
A C G T A C G T G A T C C T G A C T G A C A G T A C T G A G T C G C T A G A C T A G C T T C A G G A C T A C T G A C T G A C T G G C A T T C G A

PB0053.1_Rara_1/Jaspar

Match Rank:4
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:TVTRGTGCCTTYTAAG-
-NNNGTGACCTTTGNNN
 A G C T T G C A A G C T C T A G T A C G A C G T A C T G A T G C A G T C A G C T A G C T A G C T A G C T T C G A C G T A A T C G A C G T
A C G T G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

PB0058.1_Sfpi1_1/Jaspar

Match Rank:5
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:TVTRGTGCCTTYTAAG
-NNACTTCCTCTTNN-
 A G C T T G C A A G C T C T A G T A C G A C G T A C T G A T G C A G T C A G C T A G C T A G C T A G C T T C G A C G T A A T C G
A C G T C A G T G C T A C T G A A T G C C G A T C G A T A G T C A G T C A C G T A G T C G C A T G C A T G C T A T C G A A C G T

TATA-Box(TBP)/Promoter/Homer

Match Rank:6
Score:0.50
Offset:7
Orientation:forward strand
Alignment:TVTRGTGCCTTYTAAG---
-------CCTTTTATAGNC
 A G C T T G C A A G C T C T A G T A C G A C G T A C T G A T G C A G T C A G C T A G C T A G C T A G C T T C G A C G T A A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C

SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer

Match Rank:7
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:TVTRGTGCCTTYTAAG
--CACTTCCYCTTT--
 A G C T T G C A A G C T C T A G T A C G A C G T A C T G A T G C A G T C A G C T A G C T A G C T A G C T T C G A C G T A A T C G
A C G T A C G T T A G C T C G A A T G C A C G T A C G T A G T C A G T C A G C T G A T C G C A T G A C T G C A T A C G T A C G T

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-TVTRGTGCCTTYTAAG---
TTTTTTTTTTTTTTCAGGTT
 A C G T A G C T T G C A A G C T C T A G T A C G A C G T A C T G A T G C A G T C A G C T A G C T A G C T A G C T T C G A C G T A A T C G A C G T A C G T A C G T
G A C T G A C T A G C T A G C T A G C T A G C T A G C T A G C T A G C T G A C T G A C T G A C T G A C T G A C T G A T C C G T A A C T G T C A G C G A T C G A T

CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer

Match Rank:9
Score:0.49
Offset:5
Orientation:reverse strand
Alignment:TVTRGTGCCTTYTAAG-
-----TNCCATATATGG
 A G C T T G C A A G C T C T A G T A C G A C G T A C T G A T G C A G T C A G C T A G C T A G C T A G C T T C G A C G T A A T C G A C G T
A C G T A C G T A C G T A C G T A C G T C A G T A C T G G A T C A G T C G C T A C G A T C G T A G C A T G C T A C G A T C T A G A T C G

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-TVTRGTGCCTTYTAAG---
TTTTTTTTTTTTTTCAGGTT
 A C G T A G C T T G C A A G C T C T A G T A C G A C G T A C T G A T G C A G T C A G C T A G C T A G C T A G C T T C G A C G T A A T C G A C G T A C G T A C G T
G A C T A G C T A G C T G A C T G A C T A G C T A G C T A G C T A G C T G A C T G A C T G A C T G A C T G A C T G A T C C G T A A C T G T C A G G C A T C G A T