Information for 10-TTTAKAAGAATTT (Motif 12)

A C G T A C G T G C A T G T C A C A G T C G T A G C T A A C T G T G C A C G T A C G A T A C G T A C G T
Reverse Opposite:
G T C A C G T A C G T A A C G T A C G T A G T C C A G T A C G T G T C A A C G T C G T A C G T A C G T A
p-value:1e-9
log p-value:-2.164e+01
Information Content per bp:1.817
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif9.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets43.4 +/- 23.4bp
Average Position of motif in Background66.6 +/- 35.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0006.1_Bcl6b_1/Jaspar

Match Rank:1
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--TTTAKAAGAATTT-
TCTTTCGAGGAATTTG
 A C G T A C G T A C G T A C G T G C A T G T C A C A G T C G T A G C T A A C T G T G C A C G T A C G A T A C G T A C G T A C G T
C G A T G A T C G A C T C G A T C G A T A G T C A C T G C G T A T C A G C A T G C G T A G C T A G A C T G C A T G A C T T A C G

BCL6B/MA0731.1/Jaspar

Match Rank:2
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---TTTAKAAGAATTT-
TGCTTTCTAGGAATTCA
 A C G T A C G T A C G T A C G T A C G T G C A T G T C A C A G T C G T A G C T A A C T G T G C A C G T A C G A T A C G T A C G T A C G T
A G C T C T A G A G T C A C G T A C G T A C G T A G T C A C G T C G T A A C T G A C T G C T G A C G T A A G C T A G C T T G A C T G C A

PB0136.1_IRC900814_2/Jaspar

Match Rank:3
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TTTAKAAGAATTT----
-TTTTACGACTTTCCAT
 A C G T A C G T G C A T G T C A C A G T C G T A G C T A A C T G T G C A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T A G C T G C A T A G C T T C G A G A T C C T A G C T G A G T A C C A G T A G C T G A C T G A T C T G A C T C G A G A C T

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:4
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TTTAKAAGAATTT
TTTCTNAGAAAN-
 A C G T A C G T G C A T G T C A C A G T C G T A G C T A A C T G T G C A C G T A C G A T A C G T A C G T
A G C T A C G T A C G T A G T C G A C T G C T A C T G A A C T G C G T A C G T A T G C A G A C T A C G T

STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer

Match Rank:5
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TTTAKAAGAATTT
TTCTNNAGAANT-
 A C G T A C G T G C A T G T C A C A G T C G T A G C T A A C T G T G C A C G T A C G A T A C G T A C G T
A C G T A C G T A G T C G A C T A G C T C T G A C T G A C T A G C G T A C G T A T C G A G A C T A C G T

PB0062.1_Sox12_1/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TTTAKAAGAATTT
NTTNAGAACAATTA
 A C G T A C G T A C G T G C A T G T C A C A G T C G T A G C T A A C T G T G C A C G T A C G A T A C G T A C G T
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A

Bcl6/MA0463.1/Jaspar

Match Rank:7
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TTTAKAAGAATTT
NGCTTTCTAGGAAN--
 A C G T A C G T A C G T A C G T A C G T G C A T G T C A C A G T C G T A G C T A A C T G T G C A C G T A C G A T A C G T A C G T
C G A T C A T G G T A C G A C T A G C T G A C T A G T C A G C T C G T A C T A G C A T G T C G A G C T A G T C A A C G T A C G T

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TTTAKAAGAATTT
ATTTCCAAGAA---
 A C G T A C G T A C G T G C A T G T C A C A G T C G T A G C T A A C T G T G C A C G T A C G A T A C G T A C G T
C T G A A G C T A C G T A G C T A G T C G A T C G T C A C T G A A C T G G C T A C T G A A C G T A C G T A C G T

PB0063.1_Sox13_1/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TTTAKAAGAATTT---
TTAAGAACAATAAATT
 A C G T A C G T G C A T G T C A C A G T C G T A G C T A A C T G T G C A C G T A C G A T A C G T A C G T A C G T A C G T A C G T
C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T

PB0067.1_Sox18_1/Jaspar

Match Rank:10
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TTTAKAAGAATTT--
NNTNANAACAATTNNA
 A C G T A C G T A C G T G C A T G T C A C A G T C G T A G C T A A C T G T G C A C G T A C G A T A C G T A C G T A C G T A C G T
C G A T C A G T G C A T C A G T C G T A T C A G C G T A G C T A A G T C G C T A C G T A C G A T C A G T T C A G C G T A T C G A