Information for 7-AGAGAGCAGC (Motif 11)

T G C A A C T G T C G A A C T G G T C A C T A G G T A C C T G A A C T G A G T C
Reverse Opposite:
C T A G T G A C A G C T A C T G G A T C C A G T G T A C A G C T A G T C A C G T
p-value:1e-9
log p-value:-2.240e+01
Information Content per bp:1.818
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif3.48%
Number of Background Sequences with motif391.8
Percentage of Background Sequences with motif0.82%
Average Position of motif in Targets54.8 +/- 24.0bp
Average Position of motif in Background49.1 +/- 29.2bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:AGAGAGCAGC-
-GGGAGGACNG
 T G C A A C T G T C G A A C T G G T C A C T A G G T A C C T G A A C T G A G T C A C G T
A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G

PB0126.1_Gata5_2/Jaspar

Match Rank:2
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----AGAGAGCAGC--
GACAGAGATATCAGTGT
 A C G T A C G T A C G T A C G T A C G T T G C A A C T G T C G A A C T G G T C A C T A G G T A C C T G A A C T G A G T C A C G T A C G T
T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AGAGAGCAGC----
ADGGYAGYAGCATCT
 A C G T T G C A A C T G T C G A A C T G G T C A C T A G G T A C C T G A A C T G A G T C A C G T A C G T A C G T A C G T
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AGAGAGCAGC--
AGGAAACAGCTG
 T G C A A C T G T C G A A C T G G T C A C T A G G T A C C T G A A C T G A G T C A C G T A C G T
T C G A A C T G A C T G C G T A C G T A T C G A A G T C C T G A A T C G G T A C G C A T C A T G

PB0003.1_Ascl2_1/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AGAGAGCAGC-------
NNNNAGCAGCTGCTGAN
 T G C A A C T G T C G A A C T G G T C A C T A G G T A C C T G A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

Ascl2/MA0816.1/Jaspar

Match Rank:6
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:AGAGAGCAGC----
----AGCAGCTGCT
 T G C A A C T G T C G A A C T G G T C A C T A G G T A C C T G A A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:7
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:AGAGAGCAGC----
--NNAGCAGCTGCT
 T G C A A C T G T C G A A C T G G T C A C T A G G T A C C T G A A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.57
Offset:6
Orientation:forward strand
Alignment:AGAGAGCAGC-
------CAGCC
 T G C A A C T G T C G A A C T G G T C A C T A G G T A C C T G A A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.57
Offset:4
Orientation:forward strand
Alignment:AGAGAGCAGC--
----ANCAGCTG
 T G C A A C T G T C G A A C T G G T C A C T A G G T A C C T G A A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:AGAGAGCAGC---
---CAGCAGCTGN
 T G C A A C T G T C G A A C T G G T C A C T A G G T A C C T G A A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T