Information for 16-CAGTGGKAAAAGG (Motif 13)

A G T C C G T A A C T G C G A T A C T G C T A G A C G T G T C A C T G A C T G A C G T A A C T G C T A G
Reverse Opposite:
A G T C A G T C C G A T G A C T A G C T A C G T G T C A A G T C A G T C C G T A A G T C A C G T C T A G
p-value:1e-11
log p-value:-2.571e+01
Information Content per bp:1.831
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.97%
Number of Background Sequences with motif9.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets60.4 +/- 25.8bp
Average Position of motif in Background45.0 +/- 21.4bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR2C2/MA0504.1/Jaspar

Match Rank:1
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CAGTGGKAAAAGG---
-AGGGGTCAGAGGTCA
 A G T C C G T A A C T G C G A T A C T G C T A G A C G T G T C A C T G A C T G A C G T A A C T G C T A G A C G T A C G T A C G T
A C G T T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:2
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CAGTGGKAAAAGG
-CSTGGGAAAD--
 A G T C C G T A A C T G C G A T A C T G C T A G A C G T G T C A C T G A C T G A C G T A A C T G C T A G
A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:3
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CAGTGGKAAAAGG
-AATGGAAAAT--
 A G T C C G T A A C T G C G A T A C T G C T A G A C G T G T C A C T G A C T G A C G T A A C T G C T A G
A C G T T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T A C G T

PB0124.1_Gabpa_2/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CAGTGGKAAAAGG-
NNNNGGGGGAAGANGG
 A C G T A C G T A G T C C G T A A C T G C G A T A C T G C T A G A C G T G T C A C T G A C T G A C G T A A C T G C T A G A C G T
C T A G A C G T A T C G T C G A C T A G C A T G T A C G C T A G C T A G C T G A C G T A C T A G T G C A G A T C C T A G A C T G

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:5
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CAGTGGKAAAAGG---
--GAGGTCAAAGGTCA
 A G T C C G T A A C T G C G A T A C T G C T A G A C G T G T C A C T G A C T G A C G T A A C T G C T A G A C G T A C G T A C G T
A C G T A C G T T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A

NFAT5/MA0606.1/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CAGTGGKAAAAGG
-NATGGAAAAN--
 A G T C C G T A A C T G C G A T A C T G C T A G A C G T G T C A C T G A C T G A C G T A A C T G C T A G
A C G T G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T A C G T

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------CAGTGGKAAAAGG-
SMCAGTCWGAKGGAGGAGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G C G A T A C T G C T A G A C G T G T C A C T G A C T G A C G T A A C T G C T A G A C G T
A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C

NR2F1/MA0017.2/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CAGTGGKAAAAGG
CAAAGGTCAAGGG
 A G T C C G T A A C T G C G A T A C T G C T A G A C G T G T C A C T G A C T G A C G T A A C T G C T A G
G T A C G C T A C T G A C T G A A T C G A C T G A C G T A G T C C T G A G T C A T C A G T C A G C T A G

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CAGTGGKAAAAGG---
--TAGGGCAAAGGTCA
 A G T C C G T A A C T G C G A T A C T G C T A G A C G T G T C A C T G A C T G A C G T A A C T G C T A G A C G T A C G T A C G T
A C G T A C G T A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A

PB0118.1_Esrra_2/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CAGTGGKAAAAGG-
GGCGAGGGGTCAAGGGC
 A C G T A C G T A C G T A G T C C G T A A C T G C G A T A C T G C T A G A C G T G T C A C T G A C T G A C G T A A C T G C T A G A C G T
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C