Information for 15-AKTSTTCTRTGCS (Motif 12)

C T G A A C T G A C G T A T C G A C G T A C G T A G T C A C G T C T A G A C G T A C T G A G T C T A G C
Reverse Opposite:
A T C G A C T G A G T C C G T A A G T C C G T A A C T G C G T A C G T A A T G C G T C A G T A C A G C T
p-value:1e-11
log p-value:-2.580e+01
Information Content per bp:1.871
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif5.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets66.4 +/- 23.3bp
Average Position of motif in Background74.4 +/- 25.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0208.1_Zscan4_2/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:AKTSTTCTRTGCS---
NNNNTTGTGTGCTTNN
 C T G A A C T G A C G T A T C G A C G T A C G T A G T C A C G T C T A G A C G T A C T G A G T C T A G C A C G T A C G T A C G T
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G

PB0072.1_Sox5_1/Jaspar

Match Rank:2
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----AKTSTTCTRTGCS
NNTTTATTGTTCTNNN--
 A C G T A C G T A C G T A C G T A C G T C T G A A C T G A C G T A T C G A C G T A C G T A G T C A C G T C T A G A C G T A C T G A G T C T A G C
G C T A C G A T G C A T G A C T G C A T C G T A G A C T G C A T C T A G G A C T A G C T G A T C G A C T G C T A C G T A G C T A A C G T A C G T

PB0062.1_Sox12_1/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AKTSTTCTRTGCS
TAATTGTTCTAAAC-
 A C G T A C G T C T G A A C T G A C G T A T C G A C G T A C G T A G T C A C G T C T A G A C G T A C T G A G T C T A G C
G A C T G C T A C G T A A C G T C G A T C T A G C G A T G A C T T G A C G C A T G T C A C G T A G C T A G T A C A C G T

PB0070.1_Sox30_1/Jaspar

Match Rank:4
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------AKTSTTCTRTGCS
ANNTCCATTGTTCNNN---
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C T G A C G T A T C G A C G T A C G T A G T C A C G T C T A G A C G T A C T G A G T C T A G C
C T G A C T G A C A G T C G A T A G T C G T A C G C T A A G C T C A G T T C A G C G A T A G C T T A G C G C T A C G A T G A C T A C G T A C G T A C G T

PB0074.1_Sox8_1/Jaspar

Match Rank:5
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------AKTSTTCTRTGCS
GTATCTATTGTTCTTTA--
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C T G A C G T A T C G A C G T A C G T A G T C A C G T C T A G A C G T A C T G A G T C T A G C
C A G T C A G T C G T A C G A T A G C T G C A T C G T A G A C T C G A T T C A G C G A T G A C T G T A C G C A T C A G T C G A T C G T A A C G T A C G T

PB0063.1_Sox13_1/Jaspar

Match Rank:6
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----AKTSTTCTRTGCS
AANTTATTGTTCTNNA--
 A C G T A C G T A C G T A C G T A C G T C T G A A C T G A C G T A T C G A C G T A C G T A G T C A C G T C T A G A C G T A C T G A G T C T A G C
C G T A C G T A G C A T G C A T G C A T C G T A A G C T C G A T C T A G C G A T G A C T G T A C A G C T G C A T C T G A G C T A A C G T A C G T

PB0067.1_Sox18_1/Jaspar

Match Rank:7
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----AKTSTTCTRTGCS
TTCAATTGTTCTAAAA-
 A C G T A C G T A C G T A C G T C T G A A C T G A C G T A T C G A C G T A C G T A G T C A C G T C T A G A C G T A C T G A G T C T A G C
A G C T G C A T A G T C G T C A C G T A C G A T C G A T T C A G C G A T G C A T A G T C G C A T G T C A C G T A G T C A G C T A A C G T

PB0173.1_Sox21_2/Jaspar

Match Rank:8
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----AKTSTTCTRTGCS
AATCAATTGTTCCGCTA-
 A C G T A C G T A C G T A C G T A C G T C T G A A C T G A C G T A T C G A C G T A C G T A G T C A C G T C T A G A C G T A C T G A G T C T A G C
T G A C T C A G A G C T A T G C G C T A C G T A A G C T C G A T A T C G C G A T A G C T A T G C T G A C A C T G G A T C C A G T T C G A A C G T

PB0065.1_Sox15_1/Jaspar

Match Rank:9
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------AKTSTTCTRTGCS
ANNTCTATTGTTCNNNA--
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C T G A C G T A T C G A C G T A C G T A G T C A C G T C T A G A C G T A C T G A G T C T A G C
C G T A C G T A T C G A A G C T G A T C G C A T C G T A C G A T C G A T C T A G C G A T G A C T G T A C G C T A G T A C G A C T C G T A A C G T A C G T

Sox5/MA0087.1/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AKTSTTCTRTGCS
ATTGTTA------
 C T G A A C T G A C G T A T C G A C G T A C G T A G T C A C G T C T A G A C G T A C T G A G T C T A G C
C G T A A C G T A C G T C T A G A G C T G A C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T