Information for 4-AGATGGCACC (Motif 2)

G C T A A C T G C T G A C G A T A C T G A C T G A T G C C G T A A T G C A G T C
Reverse Opposite:
C T A G A T C G A C G T A T C G A G T C G T A C G C T A A G C T T G A C C G A T
p-value:1e-44
log p-value:-1.030e+02
Information Content per bp:1.788
Number of Target Sequences with motif57.0
Percentage of Target Sequences with motif6.54%
Number of Background Sequences with motif219.0
Percentage of Background Sequences with motif0.46%
Average Position of motif in Targets46.1 +/- 25.6bp
Average Position of motif in Background53.0 +/- 29.8bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1/MA0095.2/Jaspar

Match Rank:1
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--AGATGGCACC
CAAGATGGCGGC
 A C G T A C G T G C T A A C T G C T G A C G A T A C T G A C T G A T G C C G T A A T G C A G T C
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

Hic1/MA0739.1/Jaspar

Match Rank:2
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:AGATGGCACC
GGTTGGCAT-
 G C T A A C T G C T G A C G A T A C T G A C T G A T G C C G T A A T G C A G T C
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T

PH0164.1_Six4/Jaspar

Match Rank:3
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--AGATGGCACC-----
ATAAATGACACCTATCA
 A C G T A C G T G C T A A C T G C T G A C G A T A C T G A C T G A T G C C G T A A T G C A G T C A C G T A C G T A C G T A C G T A C G T
G C T A C A G T C T G A G T C A G C T A A G C T C A T G G T C A A G T C G T C A G T A C A G T C A G C T G T C A A G C T A G T C T C G A

YY1(Zf)/Promoter/Homer

Match Rank:4
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--AGATGGCACC
CAAGATGGCGGC
 A C G T A C G T G C T A A C T G C T G A C G A T A C T G A C T G A T G C C G T A A T G C A G T C
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C

NFIA/MA0670.1/Jaspar

Match Rank:5
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:AGATGGCACC
NNTTGGCANN
 G C T A A C T G C T G A C G A T A C T G A C T G A T G C C G T A A T G C A G T C
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:AGATGGCACC-
---TGACACCT
 G C T A A C T G C T G A C G A T A C T G A C T G A T G C C G T A A T G C A G T C A C G T
A C G T A C G T A C G T G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T

NFIX/MA0671.1/Jaspar

Match Rank:7
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:AGATGGCACC
-NTTGGCANN
 G C T A A C T G C T G A C G A T A C T G A C T G A T G C C G T A A T G C A G T C
A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:8
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:AGATGGCACC
ARNTGACA--
 G C T A A C T G C T G A C G A T A C T G A C T G A T G C C G T A A T G C A G T C
T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:9
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-AGATGGCACC-
GGGATTGCATNN
 A C G T G C T A A C T G C T G A C G A T A C T G A C T G A T G C C G T A A T G C A G T C A C G T
T C A G A T C G A C T G C T G A A C G T A C G T C A T G G T A C C T G A A G C T A G T C A G C T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:10
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---AGATGGCACC
AACAGATGGC---
 A C G T A C G T A C G T G C T A A C T G C T G A C G A T A C T G A C T G A T G C C G T A A T G C A G T C
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T A C G T