Information for 8-MCTCCCCGGGGAG (Motif 12)

G T C A A T G C A G C T T A G C A G T C G T A C T A G C A T C G A T C G A C T G A T C G C G T A A T C G
Reverse Opposite:
A T G C A C G T A T G C A G T C A T G C A T G C A C T G A C T G C T A G A C T G C T G A A T C G C A G T
p-value:1e-6
log p-value:-1.609e+01
Information Content per bp:1.790
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.03%
Number of Background Sequences with motif41.6
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets56.1 +/- 22.1bp
Average Position of motif in Background49.5 +/- 24.9bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:1
Score:0.78
Offset:2
Orientation:reverse strand
Alignment:MCTCCCCGGGGAG-
--TCCCNNGGGACN
 G T C A A T G C A G C T T A G C A G T C G T A C T A G C A T C G A T C G A C T G A T C G C G T A A T C G A C G T
A C G T A C G T G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A T A G C G A T C

PB0102.1_Zic2_1/Jaspar

Match Rank:2
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-MCTCCCCGGGGAG-
ACCCCCCCGGGGGGN
 A C G T G T C A A T G C A G C T T A G C A G T C G T A C T A G C A T C G A T C G A C T G A T C G C G T A A T C G A C G T
T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G

PB0103.1_Zic3_1/Jaspar

Match Rank:3
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-MCTCCCCGGGGAG-
NCCCCCCCGGGGGGN
 A C G T G T C A A T G C A G C T T A G C A G T C G T A C T A G C A T C G A T C G A C T G A T C G C G T A A T C G A C G T
T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G

EBF1/MA0154.3/Jaspar

Match Rank:4
Score:0.70
Offset:0
Orientation:forward strand
Alignment:MCTCCCCGGGGAG-
ATTCCCAAGGGAAT
 G T C A A T G C A G C T T A G C A G T C G T A C T A G C A T C G A T C G A C T G A T C G C G T A A T C G A C G T
C T G A A C G T G A C T A T G C A G T C A G T C G C T A C G T A T C A G T C A G C A T G C T G A G T C A G A C T

PB0101.1_Zic1_1/Jaspar

Match Rank:5
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:MCTCCCCGGGGAG-
CCCCCCCGGGGGNN
 G T C A A T G C A G C T T A G C A G T C G T A C T A G C A T C G A T C G A C T G A T C G C G T A A T C G A C G T
T A G C T G A C G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G C A G T T A C G

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.66
Offset:0
Orientation:forward strand
Alignment:MCTCCCCGGGGAG
GTCCCCAGGGGA-
 G T C A A T G C A G C T T A G C A G T C G T A C T A G C A T C G A T C G A C T G A T C G C G T A A T C G
C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A A C G T

GLIS2/MA0736.1/Jaspar

Match Rank:7
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-MCTCCCCGGGGAG
GACCCCCCGCGAAG
 A C G T G T C A A T G C A G C T T A G C A G T C G T A C T A G C A T C G A T C G A C T G A T C G C G T A A T C G
A C T G T C G A A G T C G T A C G A T C G T A C G T A C G A T C C T A G A G T C C T A G C T G A G T C A A T C G

ZIC4/MA0751.1/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-MCTCCCCGGGGAG-
GACCCCCCGCTGTGC
 A C G T G T C A A T G C A G C T T A G C A G T C G T A C T A G C A T C G A T C G A C T G A T C G C G T A A T C G A C G T
A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C

MZF1/MA0056.1/Jaspar

Match Rank:9
Score:0.61
Offset:6
Orientation:forward strand
Alignment:MCTCCCCGGGGAG
------TGGGGA-
 G T C A A T G C A G C T T A G C A G T C G T A C T A G C A T C G A T C G A C T G A T C G C G T A A T C G
A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C T G C T A G A C T G A C T G C T G A A C G T

ZIC3/MA0697.1/Jaspar

Match Rank:10
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-MCTCCCCGGGGAG-
GACCCCCCGCTGCGC
 A C G T G T C A A T G C A G C T T A G C A G T C G T A C T A G C A T C G A T C G A C T G A T C G C G T A A T C G A C G T
A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C