Information for 9-GCACGGGGCAGCA (Motif 7)

A T C G A G T C G T C A A T G C C T A G A C T G A C T G C T A G A G T C C G T A A C T G A G T C C G T A
Reverse Opposite:
C G A T C T A G A G T C C G A T A C T G A G T C A G T C A G T C A G T C A T C G A C G T A C T G A T G C
p-value:1e-11
log p-value:-2.632e+01
Information Content per bp:1.842
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.81%
Number of Background Sequences with motif70.5
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets57.8 +/- 27.5bp
Average Position of motif in Background54.2 +/- 23.8bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GCACGGGGCAGCA
-CAAAGGTCAG--
 A T C G A G T C G T C A A T G C C T A G A C T G A C T G C T A G A G T C C G T A A C T G A G T C C G T A
A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:2
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GCACGGGGCAGCA
NGCCTGAGGCN---
 A C G T A T C G A G T C G T C A A T G C C T A G A C T G A C T G C T A G A G T C C G T A A C T G A G T C C G T A
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G A C G T A C G T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----GCACGGGGCAGCA
TAGGGCAAAGGTCA---
 A C G T A C G T A C G T A C G T A T C G A G T C G T C A A T G C C T A G A C T G A C T G C T A G A G T C C G T A A C T G A G T C C G T A
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A A C G T A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----GCACGGGGCAGCA---
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A C G T A C G T A T C G A G T C G T C A A T G C C T A G A C T G A C T G C T A G A G T C C G T A A C T G A G T C C G T A A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

NRL/MA0842.1/Jaspar

Match Rank:5
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:GCACGGGGCAGCA----
------GTCAGCANNTN
 A T C G A G T C G T C A A T G C C T A G A C T G A C T G C T A G A G T C C G T A A C T G A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T

Myod1/MA0499.1/Jaspar

Match Rank:6
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:GCACGGGGCAGCA---
---NGNGACAGCTGCN
 A T C G A G T C G T C A A T G C C T A G A C T G A C T G C T A G A G T C C G T A A C T G A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:7
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GCACGGGGCAGCA
---TGAGTCAGCA
 A T C G A G T C G T C A A T G C C T A G A C T G A C T G C T A G A G T C C G T A A C T G A G T C C G T A
A C G T A C G T A C G T G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A

THAP1/MA0597.1/Jaspar

Match Rank:8
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GCACGGGGCAGCA
--TNNGGGCAG--
 A T C G A G T C G T C A A T G C C T A G A C T G A C T G C T A G A G T C C G T A A C T G A G T C C G T A
A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GCACGGGGCAGCA
AGCCTCAGGCA---
 A C G T A T C G A G T C G T C A A T G C C T A G A C T G A C T G C T A G A G T C C G T A A C T G A G T C C G T A
G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A A C G T A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GCACGGGGCAGCA
TGCCTGAGGCN---
 A C G T A T C G A G T C G T C A A T G C C T A G A C T G A C T G C T A G A G T C C G T A A C T G A G T C C G T A
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T A C G T