Information for 5-AGGTGGCGCCACA (Motif 2)

T C G A A C T G T C A G A G C T A T C G A T C G G A T C T C A G A T G C A G T C T G C A A T G C G C T A
Reverse Opposite:
C G A T T A C G A C G T C T A G A T C G A G T C C A T G A T G C T A G C T C G A A G T C G T A C A G C T
p-value:1e-35
log p-value:-8.260e+01
Information Content per bp:1.698
Number of Target Sequences with motif43.0
Percentage of Target Sequences with motif5.20%
Number of Background Sequences with motif156.1
Percentage of Background Sequences with motif0.33%
Average Position of motif in Targets52.1 +/- 25.2bp
Average Position of motif in Background43.7 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.71
Offset:-6
Orientation:reverse strand
Alignment:------AGGTGGCGCCACA-
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A C G T A C G T A C G T A C G T T C G A A C T G T C A G A G C T A T C G A T C G G A T C T C A G A T G C A G T C T G C A A T G C G C T A A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

PB0117.1_Eomes_2/Jaspar

Match Rank:2
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----AGGTGGCGCCACA
GCGGAGGTGTCGCCTC-
 A C G T A C G T A C G T A C G T T C G A A C T G T C A G A G C T A T C G A T C G G A T C T C A G A T G C A G T C T G C A A T G C G C T A
T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:3
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-AGGTGGCGCCACA--
TTGGGGGCGCCCCTAG
 A C G T T C G A A C T G T C A G A G C T A T C G A T C G G A T C T C A G A T G C A G T C T G C A A T G C G C T A A C G T A C G T
A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

CTCF/MA0139.1/Jaspar

Match Rank:4
Score:0.68
Offset:-8
Orientation:forward strand
Alignment:--------AGGTGGCGCCACA
TGGCCACCAGGGGGCGCTA--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A C T G T C A G A G C T A T C G A T C G G A T C T C A G A T G C A G T C T G C A A T G C G C T A
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A A C G T A C G T

E2F1/MA0024.3/Jaspar

Match Rank:5
Score:0.66
Offset:1
Orientation:forward strand
Alignment:AGGTGGCGCCACA
-TTTGGCGCCAAA
 T C G A A C T G T C A G A G C T A T C G A T C G G A T C T C A G A T G C A G T C T G C A A T G C G C T A
A C G T G C A T C G A T C G A T T A C G A T C G A G T C A T C G T A G C A G T C G T C A G C T A C G T A

PB0112.1_E2F2_2/Jaspar

Match Rank:6
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AGGTGGCGCCACA---
CCTTCGGCGCCAAAAGG
 A C G T T C G A A C T G T C A G A G C T A T C G A T C G G A T C T C A G A T G C A G T C T G C A A T G C G C T A A C G T A C G T A C G T
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.65
Offset:-8
Orientation:reverse strand
Alignment:--------AGGTGGCGCCACA
TGGCCACCAGGTGGCACTNT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A C T G T C A G A G C T A T C G A T C G G A T C T C A G A T G C A G T C T G C A A T G C G C T A
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T A C G T

PB0113.1_E2F3_2/Jaspar

Match Rank:8
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--AGGTGGCGCCACA--
NNNNTTGGCGCCGANNN
 A C G T A C G T T C G A A C T G T C A G A G C T A T C G A T C G G A T C T C A G A T G C A G T C T G C A A T G C G C T A A C G T A C G T
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

YY1(Zf)/Promoter/Homer

Match Rank:9
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--AGGTGGCGCCACA
CAAGATGGCGGC---
 A C G T A C G T T C G A A C T G T C A G A G C T A T C G A T C G G A T C T C A G A T G C A G T C T G C A A T G C G C T A
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C A C G T A C G T A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:10
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----AGGTGGCGCCACA
NNNAAGGGGGCGGGNNN
 A C G T A C G T A C G T A C G T T C G A A C T G T C A G A G C T A T C G A T C G G A T C T C A G A T G C A G T C T G C A A T G C G C T A
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C