Information for 7-AGGCGKCTTTGGACYT (Motif 6)

C T G A A C T G T A C G A T G C T C A G A C G T A G T C A G C T A G C T A C G T A C T G C T A G C T G A T A G C A G T C C G A T
Reverse Opposite:
C G T A C T A G A T C G A G C T A G T C G T A C C G T A C T G A T C G A A C T G G T C A A G T C A T C G A G T C A G T C A G C T
p-value:1e-17
log p-value:-4.065e+01
Information Content per bp:1.745
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.21%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets50.7 +/- 22.8bp
Average Position of motif in Background75.4 +/- 3.5bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PROX1/MA0794.1/Jaspar

Match Rank:1
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AGGCGKCTTTGGACYT
TAAGGCGTCTTG------
 A C G T A C G T C T G A A C T G T A C G A T G C T C A G A C G T A G T C A G C T A G C T A C G T A C T G C T A G C T G A T A G C A G T C C G A T
A G C T T C G A G T C A T C A G C T A G G T A C C T A G A G C T G A T C C G A T G A C T T C A G A C G T A C G T A C G T A C G T A C G T A C G T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:2
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-AGGCGKCTTTGGACYT
NRRGGGTCTT-------
 A C G T C T G A A C T G T A C G A T G C T C A G A C G T A G T C A G C T A G C T A C G T A C T G C T A G C T G A T A G C A G T C C G A T
A C T G T C G A C T A G A C T G A C T G A C T G A C G T A G T C A C G T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:3
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AGGCGKCTTTGGACYT
AGGVNCCTTTGT----
 C T G A A C T G T A C G A T G C T C A G A C G T A G T C A G C T A G C T A C G T A C T G C T A G C T G A T A G C A G T C C G A T
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T A C G T A C G T A C G T

PB0180.1_Sp4_2/Jaspar

Match Rank:4
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---AGGCGKCTTTGGACYT
CAAAGGCGTGGCCAG----
 A C G T A C G T A C G T C T G A A C T G T A C G A T G C T C A G A C G T A G T C A G C T A G C T A C G T A C T G C T A G C T G A T A G C A G T C C G A T
A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G A C G T A C G T A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:5
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:AGGCGKCTTTGGACYT
-GCTGACCTTGAACTN
 C T G A A C T G T A C G A T G C T C A G A C G T A G T C A G C T A G C T A C G T A C T G C T A G C T G A T A G C A G T C C G A T
A C G T T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:6
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:AGGCGKCTTTGGACYT
---TGACCTTGAN---
 C T G A A C T G T A C G A T G C T C A G A C G T A G T C A G C T A G C T A C G T A C T G C T A G C T G A T A G C A G T C C G A T
A C G T A C G T A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T A C G T A C G T

POL006.1_BREu/Jaspar

Match Rank:7
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:AGGCGKCTTTGGACYT
-GGCGCGCT-------
 C T G A A C T G T A C G A T G C T C A G A C G T A G T C A G C T A G C T A C G T A C T G C T A G C T G A T A G C A G T C C G A T
A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0118.1_Esrra_2/Jaspar

Match Rank:8
Score:0.49
Offset:-4
Orientation:forward strand
Alignment:----AGGCGKCTTTGGACYT
GGCGAGGGGTCAAGGGC---
 A C G T A C G T A C G T A C G T C T G A A C T G T A C G A T G C T C A G A C G T A G T C A G C T A G C T A C G T A C T G C T A G C T G A T A G C A G T C C G A T
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C A C G T A C G T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:9
Score:0.49
Offset:5
Orientation:reverse strand
Alignment:AGGCGKCTTTGGACYT
-----CCTTTGATGT-
 C T G A A C T G T A C G A T G C T C A G A C G T A G T C A G C T A G C T A C G T A C T G C T A G C T G A T A G C A G T C C G A T
A C G T A C G T A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:10
Score:0.48
Offset:3
Orientation:reverse strand
Alignment:AGGCGKCTTTGGACYT
---TGACCTTGACCT-
 C T G A A C T G T A C G A T G C T C A G A C G T A G T C A G C T A G C T A C G T A C T G C T A G C T G A T A G C A G T C C G A T
A C G T A C G T A C G T G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T