Information for 16-ATGTATCTCA (Motif 32)

C G T A C G A T A C T G A C G T T C G A A C G T A G T C A C G T A G T C C G T A
Reverse Opposite:
C G A T C T A G T C G A A C T G T C G A A G C T C G T A A G T C C G T A A C G T
p-value:1e-7
log p-value:-1.779e+01
Information Content per bp:1.849
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.45%
Number of Background Sequences with motif17.6
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets43.5 +/- 21.5bp
Average Position of motif in Background41.4 +/- 20.5bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

DMRT3/MA0610.1/Jaspar

Match Rank:1
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-ATGTATCTCA
AATGTATCAAT
 A C G T C G T A C G A T A C T G A C G T T C G A A C G T A G T C A C G T A G T C C G T A
G T C A C G T A C G A T A C T G A C G T C G T A C G A T A G T C G T C A C G T A A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:ATGTATCTCA---
-TGTCTGDCACCT
 C G T A C G A T A C T G A C G T T C G A A C G T A G T C A C G T A G T C C G T A A C G T A C G T A C G T
A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:3
Score:0.58
Offset:0
Orientation:forward strand
Alignment:ATGTATCTCA---
CTGTCTGTCACCT
 C G T A C G A T A C T G A C G T T C G A A C G T A G T C A C G T A G T C C G T A A C G T A C G T A C G T
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

RORA(var.2)/MA0072.1/Jaspar

Match Rank:4
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---ATGTATCTCA-
TATAAGTAGGTCAA
 A C G T A C G T A C G T C G T A C G A T A C T G A C G T T C G A A C G T A G T C A C G T A G T C C G T A A C G T
C G A T C G T A C G A T G T C A C G T A A T C G A C G T C T G A A C T G A C T G A C G T A G T C C G T A T C G A

PH0082.1_Irx2/Jaspar

Match Rank:5
Score:0.57
Offset:-8
Orientation:reverse strand
Alignment:--------ATGTATCTCA
ANTNTTACATGTATNTA-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G A T A C T G A C G T T C G A A C G T A G T C A C G T A G T C C G T A
C G T A T G C A G C A T G A C T G A C T C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A G A C T G C A T C G A T G C T A A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-ATGTATCTCA-
NCTGTCAATCAN
 A C G T C G T A C G A T A C T G A C G T T C G A A C G T A G T C A C G T A G T C C G T A A C G T
T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A

PH0084.1_Irx3_2/Jaspar

Match Rank:7
Score:0.56
Offset:-8
Orientation:reverse strand
Alignment:--------ATGTATCTCA
NNTATTACATGTANNNT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G A T A C T G A C G T T C G A A C G T A G T C A C G T A G T C C G T A
G C A T C T G A G C A T G C T A A C G T C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A C G A T G C T A G C A T G C A T A C G T

PH0086.1_Irx5/Jaspar

Match Rank:8
Score:0.56
Offset:-8
Orientation:reverse strand
Alignment:--------ATGTATCTCA
ANTNNTACATGTANNTN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G A T A C T G A C G T T C G A A C G T A G T C A C G T A G T C C G T A
G C T A G T C A G C A T G C A T C A G T C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A C G A T G C T A G C A T G C A T A C G T

PH0083.1_Irx3_1/Jaspar

Match Rank:9
Score:0.55
Offset:-8
Orientation:reverse strand
Alignment:--------ATGTATCTCA
ANTATTACATGTANNNN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G A T A C T G A C G T T C G A A C G T A G T C A C G T A G T C C G T A
G C T A C T A G G C A T G C T A A C G T C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A A G C T G C A T G A C T G C A T A C G T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:ATGTATCTCA
AAYTAGGTCA
 C G T A C G A T A C T G A C G T T C G A A C G T A G T C A C G T A G T C C G T A
G C T A C G T A A G T C A C G T T C G A T A C G A C T G A G C T A G T C T C G A