Information for 19-CGCAGTACGCGGC (Motif 28)

A T G C A C T G A T G C G C T A A C T G A G C T G T C A A G T C A C T G A T G C A C T G A C T G A G T C
Reverse Opposite:
A C T G A G T C T A G C A T C G G T A C A C T G A C G T C T G A A G T C C A G T A T C G A G T C A T C G
p-value:1e-8
log p-value:-1.886e+01
Information Content per bp:1.809
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets48.4 +/- 33.4bp
Average Position of motif in Background48.6 +/- 18.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0199.1_Zfp161_2/Jaspar

Match Rank:1
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-CGCAGTACGCGGC
NNGCNCTGCGCGGC
 A C G T A T G C A C T G A T G C G C T A A C T G A G C T G T C A A G T C A C T G A T G C A C T G A C T G A G T C
T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C

HINFP/MA0131.2/Jaspar

Match Rank:2
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CGCAGTACGCGGC
CAACGTCCGCGG-
 A T G C A C T G A T G C G C T A A C T G A G C T G T C A A G T C A C T G A T G C A C T G A C T G A G T C
A T G C T G C A T C G A A T G C A T C G A C G T A T G C A G T C A T C G A T G C C A T G A C T G A C G T

Zfx/MA0146.2/Jaspar

Match Rank:3
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CGCAGTACGCGGC---
--CAGGCCNNGGCCNN
 A T G C A C T G A T G C G C T A A C T G A G C T G T C A A G T C A C T G A T G C A C T G A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

CENPB/MA0637.1/Jaspar

Match Rank:4
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CGCAGTACGCGGC
TTCGTNNNANGCGGG
 A C G T A C G T A T G C A C T G A T G C G C T A A C T G A G C T G T C A A G T C A C T G A T G C A C T G A C T G A G T C
C A G T C G A T A G T C C A T G A G C T C G A T A T C G A C G T C T G A G C A T T C A G T G A C C T A G C T A G C T A G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:5
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CGCAGTACGCGGC-
DCHCAGCAGGRGGCC
 A C G T A T G C A C T G A T G C G C T A A C T G A G C T G T C A A G T C A C T G A T G C A C T G A C T G A G T C A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

PB0206.1_Zic2_2/Jaspar

Match Rank:6
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---CGCAGTACGCGGC
CCACACAGCAGGAGA-
 A C G T A C G T A C G T A T G C A C T G A T G C G C T A A C T G A G C T G T C A A G T C A C T G A T G C A C T G A C T G A G T C
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T

ZIC3/MA0697.1/Jaspar

Match Rank:7
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-CGCAGTACGCGGC-
NCGCAGCGGGGGGTC
 A C G T A T G C A C T G A T G C G C T A A C T G A G C T G T C A A G T C A C T G A T G C A C T G A C T G A G T C A C G T
C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C

PB0205.1_Zic1_2/Jaspar

Match Rank:8
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---CGCAGTACGCGGC
CCACACAGCAGGAGA-
 A C G T A C G T A C G T A T G C A C T G A T G C G C T A A C T G A G C T G T C A A G T C A C T G A T G C A C T G A C T G A G T C
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:CGCAGTACGCGGC--
---RGTTAGTGCCCY
 A T G C A C T G A T G C G C T A A C T G A G C T G T C A A G T C A C T G A T G C A C T G A C T G A G T C A C G T A C G T
A C G T A C G T A C G T C T G A C T A G A C G T G A C T G T C A A C T G A G C T A C T G A T G C G T A C G T A C A G C T

ZIC1/MA0696.1/Jaspar

Match Rank:10
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:CGCAGTACGCGGC-
CACAGCGGGGGGTC
 A T G C A C T G A T G C G C T A A C T G A G C T G T C A A G T C A C T G A T G C A C T G A C T G A G T C A C G T
T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C