Information for 16-TTTTAYCAGTAAA (Motif 26)

A C G T A C G T A C G T A C G T G T C A G A C T A G T C C G T A A C T G A G C T G T C A C G T A C G T A
Reverse Opposite:
A C G T A C G T A C G T C T G A G T A C A C G T C T A G C T G A A C G T C G T A C G T A C G T A C G T A
p-value:1e-9
log p-value:-2.163e+01
Information Content per bp:1.851
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets43.7 +/- 30.4bp
Average Position of motif in Background23.1 +/- 7.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:1
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:TTTTAYCAGTAAA
TTTTATTRGN---
 A C G T A C G T A C G T A C G T G T C A G A C T A G T C C G T A A C T G A G C T G T C A C G T A C G T A
C G A T A C G T A C G T C G A T C G T A G C A T C A G T C T G A A T C G G C T A A C G T A C G T A C G T

PB0129.1_Glis2_2/Jaspar

Match Rank:2
Score:0.69
Offset:1
Orientation:forward strand
Alignment:TTTTAYCAGTAAA--
-AATATTAATAAAGA
 A C G T A C G T A C G T A C G T G T C A G A C T A G T C C G T A A C T G A G C T G T C A C G T A C G T A A C G T A C G T
A C G T G C T A C G T A A C G T C T G A C G A T C A G T C T G A G C T A G C A T G C T A C G T A G T C A C T A G T C G A

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:3
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TTTTAYCAGTAAA
TTTTATKRGG---
 A C G T A C G T A C G T A C G T G T C A G A C T A G T C C G T A A C T G A G C T G T C A C G T A C G T A
C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G A C G T A C G T A C G T

HOXD13/MA0909.1/Jaspar

Match Rank:4
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TTTTAYCAGTAAA
NTTTTATTGG----
 A C G T A C G T A C G T A C G T A C G T G T C A G A C T A G T C C G T A A C T G A G C T G T C A C G T A C G T A
C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G A C G T A C G T A C G T A C G T

HOXC13/MA0907.1/Jaspar

Match Rank:5
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TTTTAYCAGTAAA
NTTTTACGAGN---
 A C G T A C G T A C G T A C G T A C G T G T C A G A C T A G T C C G T A A C T G A G C T G T C A C G T A C G T A
C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C A C G T A C G T A C G T

PH0078.1_Hoxd13/Jaspar

Match Rank:6
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----TTTTAYCAGTAAA
NNANTTTTATTGGNNN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A G A C T A G T C C G T A A C T G A G C T G T C A C G T A C G T A
C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G A C G T

PH0068.1_Hoxc13/Jaspar

Match Rank:7
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TTTTAYCAGTAAA
NAATTTTACGAGNTNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A G A C T A G T C C G T A A C T G A G C T G T C A C G T A C G T A
G C T A C T G A C G T A C G A T C G A T C G A T C G A T C T G A G A T C C T A G C T G A A T C G T G A C C G A T C G A T C G A T

HOXA13/MA0650.1/Jaspar

Match Rank:8
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TTTTAYCAGTAAA
TTTTTATTGG----
 A C G T A C G T A C G T A C G T A C G T G T C A G A C T A G T C C G T A A C T G A G C T G T C A C G T A C G T A
C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G A C G T A C G T A C G T A C G T

PH0048.1_Hoxa13/Jaspar

Match Rank:9
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TTTTAYCAGTAAA
ANATTTTACGAGNNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A G A C T A G T C C G T A A C T G A G C T G T C A C G T A C G T A
G C T A T C G A C G T A C G A T C A G T C G A T C G A T C T G A A G T C C T A G C T G A A T C G T A C G C G A T G C A T C G A T

HOXD12/MA0873.1/Jaspar

Match Rank:10
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TTTTAYCAGTAAA
NTTTTACGACT---
 A C G T A C G T A C G T A C G T A C G T G T C A G A C T A G T C C G T A A C T G A G C T G T C A C G T A C G T A
C A G T C G A T G C A T A G C T G C A T C T G A A G T C A T C G T C G A A G T C A G C T A C G T A C G T A C G T