Information for 13-ACWAACAAAC (Motif 21)

C T G A A G T C C G T A G T C A C T G A T G A C C G T A G C T A C G T A T A G C
Reverse Opposite:
A C T G G C A T C G A T G C A T A C T G A G C T C A G T C G A T T C A G A G C T
p-value:1e-10
log p-value:-2.498e+01
Information Content per bp:1.669
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.17%
Number of Background Sequences with motif27.3
Percentage of Background Sequences with motif0.26%
Average Position of motif in Targets55.6 +/- 21.3bp
Average Position of motif in Background53.4 +/- 23.4bp
Strand Bias (log2 ratio + to - strand density)1.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxd3/MA0041.1/Jaspar

Match Rank:1
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--ACWAACAAAC
AAACAAACATTC
 A C G T A C G T C T G A A G T C C G T A G T C A C T G A T G A C C G T A G C T A C G T A T A G C
C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C

PB0119.1_Foxa2_2/Jaspar

Match Rank:2
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---ACWAACAAAC--
AAAAATAACAAACGG
 A C G T A C G T A C G T C T G A A G T C C G T A G T C A C T G A T G A C C G T A G C T A C G T A T A G C A C G T A C G T
T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G

PB0016.1_Foxj1_1/Jaspar

Match Rank:3
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---ACWAACAAAC---
AAAGTAAACAAAAATT
 A C G T A C G T A C G T C T G A A G T C C G T A G T C A C T G A T G A C C G T A G C T A C G T A T A G C A C G T A C G T A C G T
G C T A C G A T G C T A C T A G G A C T G T C A G C T A C G T A G A T C C G T A G T C A C G T A G T C A C G T A C A G T C A G T

Foxj3/MA0851.1/Jaspar

Match Rank:4
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----ACWAACAAAC--
AAAAAGTAAACAAACAC
 A C G T A C G T A C G T A C G T A C G T C T G A A G T C C G T A G T C A C T G A T G A C C G T A G C T A C G T A T A G C A C G T A C G T
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C

PB0017.1_Foxj3_1/Jaspar

Match Rank:5
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----ACWAACAAAC--
AAAAAGTAAACAAACAC
 A C G T A C G T A C G T A C G T A C G T C T G A A G T C C G T A G T C A C T G A T G A C C G T A G C T A C G T A T A G C A C G T A C G T
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C

Foxj2/MA0614.1/Jaspar

Match Rank:6
Score:0.66
Offset:0
Orientation:forward strand
Alignment:ACWAACAAAC
GTAAACAA--
 C T G A A G T C C G T A G T C A C T G A T G A C C G T A G C T A C G T A T A G C
C T A G G C A T G T C A C G T A C G T A A G T C C G T A C G T A A C G T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:7
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:ACWAACAAAC
---AACAAT-
 C T G A A G T C C G T A G T C A C T G A T G A C C G T A G C T A C G T A T A G C
A C G T A C G T A C G T T C G A C G T A G A T C C T G A T G C A C G A T A C G T

POL007.1_BREd/Jaspar

Match Rank:8
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:ACWAACAAAC
---NANANAC
 C T G A A G T C C G T A G T C A C T G A T G A C C G T A G C T A C G T A T A G C
A C G T A C G T A C G T T G C A T G C A T G A C T G C A G T C A T C G A G A T C

PB0093.1_Zfp105_1/Jaspar

Match Rank:9
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----ACWAACAAAC-
AACAAACAACAAGAG
 A C G T A C G T A C G T A C G T C T G A A G T C C G T A G T C A C T G A T G A C C G T A G C T A C G T A T A G C A C G T
G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G

SRY/MA0084.1/Jaspar

Match Rank:10
Score:0.65
Offset:0
Orientation:forward strand
Alignment:ACWAACAAAC
GTAAACAAT-
 C T G A A G T C C G T A G T C A C T G A T G A C C G T A G C T A C G T A T A G C
A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T A C G T