Information for 12-TAAAACTAGT (Motif 20)

A C G T C T G A C G T A C G T A C G T A A G T C C A G T C G T A A C T G A G C T
Reverse Opposite:
C T G A G T A C G A C T G C T A A C T G A C G T C G A T A C G T A G C T G T C A
p-value:1e-10
log p-value:-2.531e+01
Information Content per bp:1.847
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.57%
Number of Background Sequences with motif11.6
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets53.9 +/- 21.3bp
Average Position of motif in Background35.9 +/- 15.7bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GRHL1/MA0647.1/Jaspar

Match Rank:1
Score:0.67
Offset:1
Orientation:forward strand
Alignment:TAAAACTAGT---
-AAAACCGGTTTT
 A C G T C T G A C G T A C G T A C G T A A G T C C A G T C G T A A C T G A G C T A C G T A C G T A C G T
A C G T G T C A C G T A C T G A C G T A A G T C G T A C C T A G A T C G G C A T G A C T G C A T C G A T

MEF2A/MA0052.3/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--TAAAACTAGT
TCTAAAAATAGA
 A C G T A C G T A C G T C T G A C G T A C G T A C G T A A G T C C A G T C G T A A C T G A G C T
C A G T G A T C A G C T G C T A C G T A G C T A C G T A G C T A A G C T G T C A C T A G G T C A

MEF2C/MA0497.1/Jaspar

Match Rank:3
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----TAAAACTAGT-
ATGCTAAAAATAGAA
 A C G T A C G T A C G T A C G T A C G T C T G A C G T A C G T A C G T A A G T C C A G T C G T A A C T G A G C T A C G T
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A

MEF2B/MA0660.1/Jaspar

Match Rank:4
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TAAAACTAGT
GCTATAAATAGC
 A C G T A C G T A C G T C T G A C G T A C G T A C G T A A G T C C A G T C G T A A C T G A G C T
C T A G G T A C A G C T C G T A G C A T C G T A G C T A C G T A A C G T G C T A T C A G G T A C

MEF2D/MA0773.1/Jaspar

Match Rank:5
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TAAAACTAGT
ACTATAAATAGA
 A C G T A C G T A C G T C T G A C G T A C G T A C G T A A G T C C A G T C G T A A C T G A G C T
C T G A G A T C G A C T G T C A C G A T G C T A C G T A G C T A A C G T C T G A T C A G G T C A

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:6
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TAAAACTAGT
GCTAAAAATAGC
 A C G T A C G T A C G T C T G A C G T A C G T A C G T A A G T C C A G T C G T A A C T G A G C T
A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TAAAACTAGT
DCYAAAAATAGM
 A C G T A C G T A C G T C T G A C G T A C G T A C G T A A G T C C A G T C G T A A C T G A G C T
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C

PH0040.1_Hmbox1/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TAAAACTAGT-------
GAAAACTAGTTAACATC
 A C G T C T G A C G T A C G T A C G T A A G T C C A G T C G T A A C T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T C A G G C T A C T G A C T G A C G T A A G T C A C G T C T G A C T A G A C G T G C A T C G T A C G T A A G T C C G T A C G A T A T G C

PH0075.1_Hoxd10/Jaspar

Match Rank:9
Score:0.63
Offset:-7
Orientation:forward strand
Alignment:-------TAAAACTAGT
AATGCAATAAAATTTAT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C G T A C G T A C G T A A G T C C A G T C G T A A C T G A G C T
T G C A C T G A A C G T T C A G G A T C G T C A C G T A A G C T C G T A C G T A C G T A T C G A G A C T C G A T C G A T C G T A G C A T

PH0056.1_Hoxa9/Jaspar

Match Rank:10
Score:0.63
Offset:-7
Orientation:forward strand
Alignment:-------TAAAACTAGT
ACGGCCATAAAATTAAT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C G T A C G T A C G T A A G T C C A G T C G T A A C T G A G C T
C T G A T G A C C T A G A T C G G A T C G T A C C T G A C G A T G C T A C G T A C G T A C G T A G C A T C A G T C G T A C T G A C G A T