Information for 10-CATAGTGTCA (Motif 18)

A G T C G T C A G C A T C G T A C T A G G C A T C T A G G A C T G A T C G C T A
Reverse Opposite:
C G A T C T A G C T G A G A T C C G T A G A T C G C A T C G T A C A G T T C A G
p-value:1e-11
log p-value:-2.556e+01
Information Content per bp:1.449
Number of Target Sequences with motif58.0
Percentage of Target Sequences with motif7.00%
Number of Background Sequences with motif265.1
Percentage of Background Sequences with motif2.52%
Average Position of motif in Targets51.9 +/- 25.1bp
Average Position of motif in Background48.8 +/- 30.3bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:1
Score:0.72
Offset:2
Orientation:forward strand
Alignment:CATAGTGTCA--
--AGGTGTGAAM
 A G T C G T C A G C A T C G T A C T A G G C A T C T A G G A C T G A T C G C T A A C G T A C G T
A C G T A C G T C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:2
Score:0.70
Offset:5
Orientation:forward strand
Alignment:CATAGTGTCA---
-----TGTCANYT
 A G T C G T C A G C A T C G T A C T A G G C A T C T A G G A C T G A T C G C T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:3
Score:0.69
Offset:4
Orientation:reverse strand
Alignment:CATAGTGTCA-
----NTGTCAN
 A G T C G T C A G C A T C G T A C T A G G C A T C T A G G A C T G A T C G C T A A C G T
A C G T A C G T A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:4
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:CATAGTGTCA---
---VBTGWCAGCB
 A G T C G T C A G C A T C G T A C T A G G C A T C T A G G A C T G A T C G C T A A C G T A C G T A C G T
A C G T A C G T A C G T T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:5
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:CATAGTGTCA-
---RHTGWCAR
 A G T C G T C A G C A T C G T A C T A G G C A T C T A G G A C T G A T C G C T A A C G T
A C G T A C G T A C G T C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A

TBX2/MA0688.1/Jaspar

Match Rank:6
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CATAGTGTCA--
-AAGGTGTGAAA
 A G T C G T C A G C A T C G T A C T A G G C A T C T A G G A C T G A T C G C T A A C G T A C G T
A C G T C G T A C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A C G T A C G T A

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.67
Offset:2
Orientation:forward strand
Alignment:CATAGTGTCA
--AGGTGTCA
 A G T C G T C A G C A T C G T A C T A G G C A T C T A G G A C T G A T C G C T A
A C G T A C G T C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A

PH0164.1_Six4/Jaspar

Match Rank:8
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CATAGTGTCA-----
TNNNNGGTGTCATNTNT
 A C G T A C G T A G T C G T C A G C A T C G T A C T A G G C A T C T A G G A C T G A T C G C T A A C G T A C G T A C G T A C G T A C G T
A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:9
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CATAGTGTCA-
-AAGGTGTKAA
 A G T C G T C A G C A T C G T A C T A G G C A T C T A G G A C T G A T C G C T A A C G T
A C G T C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A

TBX4/MA0806.1/Jaspar

Match Rank:10
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CATAGTGTCA
--AGGTGTGA
 A G T C G T C A G C A T C G T A C T A G G C A T C T A G G A C T G A T C G C T A
A C G T A C G T C T G A T C A G T A C G A G C T A C T G G A C T A C T G C T G A