Information for 9-CCASAGACMCATGSGY (Motif 10)

G A T C A G T C C T G A A T C G C G T A A T C G C G T A A G T C G T C A A G T C T C G A A C G T C T A G A T C G A C T G G A C T
Reverse Opposite:
C T G A A G T C A T G C A G T C G T C A A G C T T A C G A C G T A C T G A C G T T A G C A C G T A T G C G A C T A C T G C T A G
p-value:1e-13
log p-value:-3.105e+01
Information Content per bp:1.769
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.97%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets58.2 +/- 17.3bp
Average Position of motif in Background26.3 +/- 7.8bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1/MA0002.2/Jaspar

Match Rank:1
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CCASAGACMCATGSGY
AAACCACAGAN--------
 A C G T A C G T A C G T G A T C A G T C C T G A A T C G C G T A A T C G C G T A A G T C G T C A A G T C T C G A A C G T C T A G A T C G A C T G G A C T
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:2
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CCASAGACMCATGSGY
NWAACCACADNN--------
 A C G T A C G T A C G T A C G T G A T C A G T C C T G A A T C G C G T A A T C G C G T A A G T C G T C A A G T C T C G A A C G T C T A G A T C G A C T G G A C T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Bhlha15/MA0607.1/Jaspar

Match Rank:3
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:CCASAGACMCATGSGY
------ACATATGG--
 G A T C A G T C C T G A A T C G C G T A A T C G C G T A A G T C G T C A A G T C T C G A A C G T C T A G A T C G A C T G G A C T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G T C C G T A A C G T G T C A A C G T A C T G A T C G A C G T A C G T

Twist2/MA0633.1/Jaspar

Match Rank:4
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:CCASAGACMCATGSGY
-----NACATATGGN-
 G A T C A G T C C T G A A T C G C G T A A T C G C G T A A G T C G T C A A G T C T C G A A C G T C T A G A T C G A C T G G A C T
A C G T A C G T A C G T A C G T A C G T G T C A G T C A A G T C C G T A A G C T C T G A A C G T A C T G A C T G A G C T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:CCASAGACMCATGSGY
--CCAGACRSVB----
 G A T C A G T C C T G A A T C G C G T A A T C G C G T A A G T C G T C A A G T C T C G A A C G T C T A G A T C G A C T G G A C T
A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---CCASAGACMCATGSGY
AAACCACAGC---------
 A C G T A C G T A C G T G A T C A G T C C T G A A T C G C G T A A T C G C G T A A G T C G T C A A G T C T C G A A C G T C T A G A T C G A C T G G A C T
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Hes2/MA0616.1/Jaspar

Match Rank:7
Score:0.51
Offset:1
Orientation:forward strand
Alignment:CCASAGACMCATGSGY
-TAACGACACGTGC--
 G A T C A G T C C T G A A T C G C G T A A T C G C G T A A G T C G T C A A G T C T C G A A C G T C T A G A T C G A C T G G A C T
A C G T A C G T C G T A C G T A T A G C A T C G C T G A G T A C C T G A G T A C C T A G A C G T C T A G G T A C A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:CCASAGACMCATGSGY
--CCAGACAG------
 G A T C A G T C C T G A A T C G C G T A A T C G C G T A A G T C G T C A A G T C T C G A A C G T C T A G A T C G A C T G G A C T
A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Npas2/MA0626.1/Jaspar

Match Rank:9
Score:0.50
Offset:5
Orientation:reverse strand
Alignment:CCASAGACMCATGSGY
-----NACACGTGCN-
 G A T C A G T C C T G A A T C G C G T A A T C G C G T A A G T C G T C A A G T C T C G A A C G T C T A G A T C G A C T G G A C T
A C G T A C G T A C G T A C G T A C G T A C T G T G C A A G T C C G T A A G T C A C T G A C G T A C T G A T G C G A T C A C G T

Myc/MA0147.2/Jaspar

Match Rank:10
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:CCASAGACMCATGSGY
----AAGCACATGG--
 G A T C A G T C C T G A A T C G C G T A A T C G C G T A A G T C G T C A A G T C T C G A A C G T C T A G A T C G A C T G G A C T
A C G T A C G T A C G T A C G T T C G A C T G A T A C G A G T C C G T A A G T C C T G A A C G T A C T G A C T G A C G T A C G T