Information for 9-TTTGGGAAGTGCC (Motif 7)

A G C T C A G T A C G T A C T G A C T G C A T G G C T A C G T A A C T G A C G T C T A G A G T C G T A C
Reverse Opposite:
A C T G A C T G A G T C C G T A T G A C A C G T C A G T G A T C A G T C A G T C C G T A G C T A C T G A
p-value:1e-10
log p-value:-2.398e+01
Information Content per bp:1.806
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.22%
Number of Background Sequences with motif25.6
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets65.9 +/- 25.1bp
Average Position of motif in Background41.5 +/- 29.5bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:1
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:TTTGGGAAGTGCC
---GGGAATTTCC
 A G C T C A G T A C G T A C T G A C T G C A T G G C T A C G T A A C T G A C G T C T A G A G T C G T A C
A C G T A C G T A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C

HES7/MA0822.1/Jaspar

Match Rank:2
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:TTTGGGAAGTGCC-
--TGGCACGTGCCA
 A G C T C A G T A C G T A C T G A C T G C A T G G C T A C G T A A C T G A C G T C T A G A G T C G T A C A C G T
A C G T A C G T G A C T T A C G C T A G A G T C C G T A A G T C A C T G A G C T C T A G A G T C A G T C C T G A

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:3
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:TTTGGGAAGTGCC--
---GGGAAATCCCCN
 A G C T C A G T A C G T A C T G A C T G C A T G G C T A C G T A A C T G A C G T C T A G A G T C G T A C A C G T A C G T
A C G T A C G T A C G T C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

HES5/MA0821.1/Jaspar

Match Rank:4
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:TTTGGGAAGTGCC-
--TGGCACGTGCCG
 A G C T C A G T A C G T A C T G A C T G C A T G G C T A C G T A A C T G A C G T C T A G A G T C G T A C A C G T
A C G T A C G T G A C T T C A G T C A G A G T C C T G A A G T C C A T G A G C T A C T G A G T C A G T C C T A G

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TTTGGGAAGTGCC
CSTGGGAAAD---
 A G C T C A G T A C G T A C T G A C T G C A T G G C T A C G T A A C T G A C G T C T A G A G T C G T A C
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:6
Score:0.59
Offset:3
Orientation:forward strand
Alignment:TTTGGGAAGTGCC
---GGGAATTTCC
 A G C T C A G T A C G T A C T G A C T G C A T G G C T A C G T A A C T G A C G T C T A G A G T C G T A C
A C G T A C G T A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C

MF0003.1_REL_class/Jaspar

Match Rank:7
Score:0.59
Offset:3
Orientation:forward strand
Alignment:TTTGGGAAGTGCC
---GGGGATTTCC
 A G C T C A G T A C G T A C T G A C T G C A T G G C T A C G T A A C T G A C G T C T A G A G T C G T A C
A C G T A C G T A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C

PB0133.1_Hic1_2/Jaspar

Match Rank:8
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TTTGGGAAGTGCC
NNNNTTGGGCACNNCN
 A C G T A C G T A C G T A G C T C A G T A C G T A C T G A C T G C A T G G C T A C G T A A C T G A C G T C T A G A G T C G T A C
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TTTGGGAAGTGCC
-AGAGGAAGTG--
 A G C T C A G T A C G T A C T G A C T G C A T G G C T A C G T A A C T G A C G T C T A G A G T C G T A C
A C G T C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G A C G T A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:10
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:TTTGGGAAGTGCC-
----TTAAGTGCTT
 A G C T C A G T A C G T A C T G A C T G C A T G G C T A C G T A A C T G A C G T C T A G A G T C G T A C A C G T
A C G T A C G T A C G T A C G T A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T