Information for 7-CCCTTGCTTTGTG (Motif 7)

A G T C A G T C A G T C A G C T A C G T A C T G A G T C A C G T A C G T A C G T A C T G A C G T A C T G
Reverse Opposite:
A G T C C G T A G T A C C G T A C G T A C G T A A C T G A G T C C G T A C T G A T A C G A C T G A C T G
p-value:1e-10
log p-value:-2.512e+01
Information Content per bp:1.914
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.0 +/- 16.1bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX10/MA0442.1/Jaspar

Match Rank:1
Score:0.65
Offset:6
Orientation:forward strand
Alignment:CCCTTGCTTTGTG
------CTTTGT-
 A G T C A G T C A G T C A G C T A C G T A C T G A G T C A C G T A C G T A C G T A C T G A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:2
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CCCTTGCTTTGTG-----
--ANTCCTTTGTCTNNNN
 A G T C A G T C A G T C A G C T A C G T A C T G A G T C A C G T A C G T A C G T A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:3
Score:0.63
Offset:5
Orientation:forward strand
Alignment:CCCTTGCTTTGTG--
-----CCWTTGTYYB
 A G T C A G T C A G T C A G C T A C G T A C T G A G T C A C G T A C G T A C G T A C T G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CCCTTGCTTTGTG-
NCCGTTGCTANGNGN
 A C G T A G T C A G T C A G T C A G C T A C G T A C T G A G T C A C G T A C G T A C G T A C T G A C G T A C T G A C G T
G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G

ZNF143/MA0088.2/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CCCTTGCTTTGTG----
-CAATGCATTGTGGGTA
 A G T C A G T C A G T C A G C T A C G T A C T G A G T C A C G T A C G T A C G T A C T G A C G T A C T G A C G T A C G T A C G T A C G T
A C G T G A T C C T G A C T G A C A G T A C T G A G T C G C T A G A C T A G C T T C A G G A C T A C T G A C T G A C T G G C A T T C G A

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:6
Score:0.58
Offset:5
Orientation:forward strand
Alignment:CCCTTGCTTTGTG--
-----YCTTTGTTCC
 A G T C A G T C A G T C A G C T A C G T A C T G A G T C A C G T A C G T A C G T A C T G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CCCTTGCTTTGTG
CCCCCTGCTGTG--
 A C G T A G T C A G T C A G T C A G C T A C G T A C T G A G T C A C G T A C G T A C G T A C T G A C G T A C T G
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:8
Score:0.58
Offset:5
Orientation:forward strand
Alignment:CCCTTGCTTTGTG--
-----CCTTTGTTTT
 A G T C A G T C A G T C A G C T A C G T A C T G A G T C A C G T A C G T A C G T A C T G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:9
Score:0.58
Offset:5
Orientation:forward strand
Alignment:CCCTTGCTTTGTG
-----CCWTTGTY
 A G T C A G T C A G T C A G C T A C G T A C T G A G T C A C G T A C G T A C G T A C T G A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T

Tcf7/MA0769.1/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CCCTTGCTTTGTG
CCTTTGATCTTT-
 A G T C A G T C A G T C A G C T A C G T A C T G A G T C A C G T A C G T A C G T A C T G A C G T A C T G
A G T C A G T C C G A T A G C T G C A T A T C G T G C A G C A T T A G C G C A T G A C T G A C T A C G T