Information for 5-AAAAAAAAAAAAAAAA (Motif 12)

G C T A G T C A T G C A T G C A C T G A C T G A C T G A C T G A T C G A T C G A T C G A C T G A C T G A C T G A C T G A C G T A
Reverse Opposite:
G C A T G A C T G A C T A G C T A G C T A C G T A G C T A C G T A G C T A G C T A G C T A G C T A C G T A C G T C A G T C G A T
p-value:1e-2
log p-value:-5.059e+00
Information Content per bp:1.791
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif94.7
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets39.6 +/- 17.5bp
Average Position of motif in Background51.9 +/- 29.2bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0182.1_Srf_2/Jaspar

Match Rank:1
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--AAAAAAAAAAAAAAAA
GTTAAAAAAAAAAATTA-
 A C G T A C G T G C T A G T C A T G C A T G C A C T G A C T G A C T G A C T G A T C G A T C G A T C G A C T G A C T G A C T G A C T G A C G T A
T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T A C G T

PB0093.1_Zfp105_1/Jaspar

Match Rank:2
Score:0.71
Offset:1
Orientation:forward strand
Alignment:AAAAAAAAAAAAAAAA
-AACAAACAACAAGAG
 G C T A G T C A T G C A T G C A C T G A C T G A C T G A C T G A T C G A T C G A T C G A C T G A C T G A C T G A C T G A C G T A
A C G T G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:3
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-AAAAAAAAAAAAAAAA
TACTGGAAAAAAAA---
 A C G T G C T A G T C A T G C A T G C A C T G A C T G A C T G A C T G A T C G A T C G A T C G A C T G A C T G A C T G A C T G A C G T A
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A A C G T A C G T A C G T

PB0148.1_Mtf1_2/Jaspar

Match Rank:4
Score:0.66
Offset:2
Orientation:forward strand
Alignment:AAAAAAAAAAAAAAAA
--AAATAAGAAAAAAC
 G C T A G T C A T G C A T G C A C T G A C T G A C T G A C T G A T C G A T C G A T C G A C T G A C T G A C T G A C T G A C G T A
A C G T A C G T G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C

PB0116.1_Elf3_2/Jaspar

Match Rank:5
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--AAAAAAAAAAAAAAAA
GTTCAAAAAAAAAATTC-
 A C G T A C G T G C T A G T C A T G C A T G C A C T G A C T G A C T G A C T G A T C G A T C G A T C G A C T G A C T G A C T G A C T G A C G T A
C A T G A G C T A C G T G T A C G T C A C G T A G C T A G C T A G C T A G C T A G C T A G C T A G C T A G T C A G A C T C G A T G A T C A C G T

FOXP1/MA0481.1/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AAAAAAAAAAAAAAAA
CAAAAGTAAACAAAG-
 G C T A G T C A T G C A T G C A C T G A C T G A C T G A C T G A T C G A T C G A T C G A C T G A C T G A C T G A C T G A C G T A
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:7
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:AAAAAAAAAAAAAAAA-
-----AAACAAACATTC
 G C T A G T C A T G C A T G C A C T G A C T G A C T G A C T G A T C G A T C G A T C G A C T G A C T G A C T G A C T G A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C

PB0123.1_Foxl1_2/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AAAAAAAAAAAAAAAA
ATATCAAAACAAAACA
 G C T A G T C A T G C A T G C A C T G A C T G A C T G A C T G A T C G A T C G A T C G A C T G A C T G A C T G A C T G A C G T A
G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A

FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AAAAAAAAAAAAAAAA----
AGTAAACAAAAAAGAACANN
 G C T A G T C A T G C A T G C A C T G A C T G A C T G A C T G A T C G A T C G A T C G A C T G A C T G A C T G A C T G A C G T A A C G T A C G T A C G T A C G T
C G T A C T A G G A C T G T C A G T C A C G T A A G T C C G T A T C G A T C G A T C G A C G T A C T G A C T A G G C T A C G T A T A G C C G T A C G A T C G T A

PB0186.1_Tcf3_2/Jaspar

Match Rank:10
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----AAAAAAAAAAAAAAAA
AGCCGAAAAAAAAAT-----
 A C G T A C G T A C G T A C G T G C T A G T C A T G C A T G C A C T G A C T G A C T G A C T G A T C G A T C G A T C G A C T G A C T G A C T G A C T G A C G T A
C T G A T A C G A T G C T A G C A C T G C G T A C T G A G C T A G C T A G C T A T G C A G C T A T C G A G C T A G C A T A C G T A C G T A C G T A C G T A C G T