Information for 3-TGAAYWGCARRTG (Motif 4)

A C G T A C T G C G T A C T G A G A T C C G T A A C T G T A G C C G T A C T G A C T A G A C G T A C T G
Reverse Opposite:
A G T C C G T A A G T C A G C T C G A T A T C G A G T C C G A T C T A G A G C T A C G T A G T C G T C A
p-value:1e-12
log p-value:-2.911e+01
Information Content per bp:1.853
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.23%
Number of Background Sequences with motif15.4
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets42.6 +/- 24.7bp
Average Position of motif in Background45.4 +/- 24.6bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:TGAAYWGCARRTG---
----SDGCAGGTGCNS
 A C G T A C T G C G T A C T G A G A T C C G T A A C T G T A G C C G T A C T G A C T A G A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

TCF3/MA0522.2/Jaspar

Match Rank:2
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:TGAAYWGCARRTG--
-----NNCAGGTGTN
 A C G T A C T G C G T A C T G A G A T C C G T A A C T G T A G C C G T A C T G A C T A G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T C A T C A G A G T C C G T A A T C G T A C G C G A T A C T G A G C T C A G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:TGAAYWGCARRTG--
-----NNCAGGTGNN
 A C G T A C T G C G T A C T G A G A T C C G T A A C T G T A G C C G T A C T G A C T A G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G

SNAI2/MA0745.1/Jaspar

Match Rank:4
Score:0.60
Offset:5
Orientation:forward strand
Alignment:TGAAYWGCARRTG-
-----AACAGGTGT
 A C G T A C T G C G T A C T G A G A T C C G T A A C T G T A G C C G T A C T G A C T A G A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T

TCF4/MA0830.1/Jaspar

Match Rank:5
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:TGAAYWGCARRTG--
-----NNCAGGTGCG
 A C G T A C T G C G T A C T G A G A T C C G T A A C T G T A G C C G T A C T G A C T A G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A T A C G G A T C C G T A A T C G T A C G A C G T C T A G A G T C C T A G

PB0047.1_Myf6_1/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TGAAYWGCARRTG----
-GAAGAACAGGTGTCCG
 A C G T A C T G C G T A C T G A G A T C C G T A A C T G T A G C C G T A C T G A C T A G A C G T A C T G A C G T A C G T A C G T A C G T
A C G T T C A G T C G A C T G A A T C G T C G A C T G A A G T C C G T A A T C G A C T G G A C T A C T G A C G T A G T C G A T C A C T G

PB0003.1_Ascl2_1/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TGAAYWGCARRTG-----
-NNNNAGCAGCTGCTGAN
 A C G T A C T G C G T A C T G A G A T C C G T A A C T G T A G C C G T A C T G A C T A G A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer

Match Rank:8
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------TGAAYWGCARRTG-
NVCAKCTGGNNNCCAGMTGB
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A C T G A G A T C C G T A A C T G T A G C C G T A C T G A C T A G A C G T A C T G A C G T
T A C G T G A C T G A C C G T A A C T G T A G C C G A T A C T G A T C G A G C T A T G C T C G A T A G C G T A C C G T A A C T G T G A C G C A T A C T G A C T G

ID4/MA0824.1/Jaspar

Match Rank:9
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:TGAAYWGCARRTG--
-----GACAGGTGTN
 A C G T A C T G C G T A C T G A G A T C C G T A A C T G T A G C C G T A C T G A C T A G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TGAAYWGCARRTG
TGGAACAGMA----
 A C G T A C G T A C T G C G T A C T G A G A T C C G T A A C T G T A G C C G T A C T G A C T A G A C G T A C T G
C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A A C G T A C G T A C G T A C G T