Information for 5-CTCTGHGACAGTGCCA (Motif 3)

A G T C A C G T A G T C C G A T A C T G G T A C A T C G C G T A A G T C C G T A A C T G A G C T A C T G A G T C A G T C C G T A
Reverse Opposite:
C G A T A C T G A C T G A G T C C T G A A G T C C G A T A C T G C G A T A T G C C A G T A G T C C G T A A C T G G T C A A C T G
p-value:1e-13
log p-value:-3.109e+01
Information Content per bp:1.817
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.7 +/- 18.3bp
Average Position of motif in Background73.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CTCTGHGACAGTGCCA--
GAGCCTGGTACTGWGCCTGR
 A C G T A C G T A G T C A C G T A G T C C G A T A C T G G T A C A T C G C G T A A G T C C G T A A C T G A G C T A C T G A G T C A G T C C G T A A C G T A C G T
T A C G C T G A C A T G G A T C G T A C G C A T T C A G T A C G A G C T G T C A G A T C G C A T T A C G C G T A C T A G G A T C G A T C C G A T A C T G T C A G

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CTCTGHGACAGTGCCA--
--TTGGCANNNTGCCAAG
 A G T C A C G T A G T C C G A T A C T G G T A C A T C G C G T A A G T C C G T A A C T G A G C T A C T G A G T C A G T C C G T A A C G T A C G T
A C G T A C G T G A C T C A G T A C T G C T A G T G A C G C T A T A G C C G T A T A C G C G A T A C T G G A T C G T A C G T C A C T G A T C A G

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:3
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CTCTGHGACAGTGCCA-
---TGGCACCATGCCAA
 A G T C A C G T A G T C C G A T A C T G G T A C A T C G C G T A A G T C C G T A A C T G A G C T A C T G A G T C A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C T G A C T G A G T C G C T A T A G C A T G C C T G A G C A T A C T G A G T C A G T C C G T A C G T A

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:4
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CTCTGHGACAGTGCCA
--CTGGCAGNCTGCCA
 A G T C A C G T A G T C C G A T A C T G G T A C A T C G C G T A A G T C C G T A A C T G A G C T A C T G A G T C A G T C C G T A
A C G T A C G T A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.54
Offset:9
Orientation:forward strand
Alignment:CTCTGHGACAGTGCCA--
---------CGTGCCAAG
 A G T C A C G T A G T C C G A T A C T G G T A C A T C G C G T A A G T C C G T A A C T G A G C T A C T G A G T C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CTCTGHGACAGTGCCA
-TCAGNGAGCGTGAC-
 A G T C A C G T A G T C C G A T A C T G G T A C A T C G C G T A A G T C C G T A A C T G A G C T A C T G A G T C A G T C C G T A
A C G T A C G T T A G C T C G A A T C G T A C G T C A G C T G A A T C G A G T C C T A G G A C T C T A G C T G A T G A C A C G T

Hic1/MA0739.1/Jaspar

Match Rank:7
Score:0.52
Offset:10
Orientation:forward strand
Alignment:CTCTGHGACAGTGCCA---
----------ATGCCAACC
 A G T C A C G T A G T C C G A T A C T G G T A C A T C G C G T A A G T C C G T A A C T G A G C T A C T G A G T C A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C

NFIA/MA0670.1/Jaspar

Match Rank:8
Score:0.52
Offset:9
Orientation:forward strand
Alignment:CTCTGHGACAGTGCCA---
---------GGTGCCAAGT
 A G T C A C G T A G T C C G A T A C T G G T A C A T C G C G T A A G T C C G T A A C T G A G C T A C T G A G T C A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T

MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer

Match Rank:9
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CTCTGHGACAGTGCCA
TGCTGASTCAGC----
 A G T C A C G T A G T C C G A T A C T G G T A C A T C G C G T A A G T C C G T A A C T G A G C T A C T G A G T C A G T C C G T A
A C G T A T C G T G A C G C A T C A T G C G T A T A G C G A C T G A T C C T G A A T C G A G T C A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:10
Score:0.52
Offset:11
Orientation:reverse strand
Alignment:CTCTGHGACAGTGCCA-
-----------TGCCAA
 A G T C A C G T A G T C C G A T A C T G G T A C A T C G C G T A A G T C C G T A A C T G A G C T A C T G A G T C A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A