Information for 4-TAACCTGAGCTAGCCT (Motif 2)

C G A T G T C A C G T A A G T C A G T C C A G T C T A G T C G A T A C G G A T C G C A T C G T A A C T G G T A C A T G C G A C T
Reverse Opposite:
C G T A A T C G A C T G A G T C A C G T C G T A C T A G A G T C A G C T A G T C G C T A A C T G T A C G C G A T A C G T C G T A
p-value:1e-13
log p-value:-3.109e+01
Information Content per bp:1.732
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.8 +/- 29.4bp
Average Position of motif in Background56.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr1h3::Rxra/MA0494.1/Jaspar

Match Rank:1
Score:0.54
Offset:0
Orientation:forward strand
Alignment:TAACCTGAGCTAGCCT---
TGACCTAAAGTAACCTCTG
 C G A T G T C A C G T A A G T C A G T C C A G T C T A G T C G A T A C G G A T C G C A T C G T A A C T G G T A C A T G C G A C T A C G T A C G T A C G T
A G C T T C A G G T C A G T A C G A T C A G C T T C G A C T G A C T G A C T A G C G A T C T G A T C G A G T A C G T A C A G C T A G T C C A G T A C T G

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:2
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:TAACCTGAGCTAGCCT
TGWCCTCARNTGACC-
 C G A T G T C A C G T A A G T C A G T C C A G T C T A G T C G A T A C G G A T C G C A T C G T A A C T G G T A C A T G C G A C T
G C A T T A C G C G T A G T A C A G T C G A C T A G T C T C G A T C A G T C G A C G A T T C A G T G C A G T A C G A T C A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.52
Offset:9
Orientation:reverse strand
Alignment:TAACCTGAGCTAGCCT-
---------BCAGACWA
 C G A T G T C A C G T A A G T C A G T C C A G T C T A G T C G A T A C G G A T C G C A T C G T A A C T G G T A C A T G C G A C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer

Match Rank:4
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:TAACCTGAGCTAGCCT
--TGCTGASTCAGC--
 C G A T G T C A C G T A A G T C A G T C C A G T C T A G T C G A T A C G G A T C G C A T C G T A A C T G G T A C A T G C G A C T
A C G T A C G T A C G T A T C G T G A C G C A T C A T G C G T A T A G C G A C T G A T C C T G A A T C G A G T C A C G T A C G T

LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:TAACCTGAGCTAGCCT
TGACCTNTAGTAACCC
 C G A T G T C A C G T A A G T C A G T C C A G T C T A G T C G A T A C G G A T C G C A T C G T A A C T G G T A C A T G C G A C T
G A C T C T A G T G C A G T A C G A T C A G C T T A C G C A G T C T G A C T A G G C A T C T G A C T G A G T A C G T A C G A T C

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.50
Offset:10
Orientation:forward strand
Alignment:TAACCTGAGCTAGCCT
----------CAGCC-
 C G A T G T C A C G T A A G T C A G T C C A G T C T A G T C G A T A C G G A T C G C A T C G T A A C T G G T A C A T G C G A C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T

PB0185.1_Tcf1_2/Jaspar

Match Rank:7
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--TAACCTGAGCTAGCCT
NNTAATCCNGNCNN----
 A C G T A C G T C G A T G T C A C G T A A G T C A G T C C A G T C T A G T C G A T A C G G A T C G C A T C G T A A C T G G T A C A T G C G A C T
G A T C G T A C G C A T T G C A G T C A G A C T G T A C A G T C T C A G A T C G C T A G A G T C T G C A C G T A A C G T A C G T A C G T A C G T

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:8
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-TAACCTGAGCTAGCCT
GWAAYHTGABMC-----
 A C G T C G A T G T C A C G T A A G T C A G T C C A G T C T A G T C G A T A C G G A T C G C A T C G T A A C T G G T A C A T G C G A C T
A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C A C G T A C G T A C G T A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:9
Score:0.48
Offset:0
Orientation:forward strand
Alignment:TAACCTGAGCTAGCCT
AAATCACAGCA-----
 C G A T G T C A C G T A A G T C A G T C C A G T C T A G T C G A T A C G G A T C G C A T C G T A A C T G G T A C A T G C G A C T
T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A A C G T A C G T A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.48
Offset:1
Orientation:forward strand
Alignment:TAACCTGAGCTAGCCT
-WDNCTGGGCA-----
 C G A T G T C A C G T A A G T C A G T C C A G T C T A G T C G A T A C G G A T C G C A T C G T A A C T G G T A C A T G C G A C T
A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T