Information for 6-CAGGTGCAGTGAC (Motif 6)

G T A C C G T A A C T G A C T G A G C T A T C G A G T C C G T A A T C G A C G T A T C G C G T A G T A C
Reverse Opposite:
A C T G A C G T A T G C C G T A A T G C A C G T A C T G T A G C C T G A A G T C A G T C A C G T A C T G
p-value:1e-12
log p-value:-2.917e+01
Information Content per bp:1.852
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.13%
Number of Background Sequences with motif10.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets52.2 +/- 25.7bp
Average Position of motif in Background43.2 +/- 16.7bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:1
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----CAGGTGCAGTGAC
ATCCACAGGTGCGAAAA-
 A C G T A C G T A C G T A C G T A C G T G T A C C G T A A C T G A C T G A G C T A T C G A G T C C G T A A T C G A C G T A T C G C G T A G T A C
T C G A A C G T G T A C G T A C T G C A G T A C G T C A A T C G T A C G A G C T A C T G A G T C C T A G T C G A C G T A G T C A C G T A A C G T

ID4/MA0824.1/Jaspar

Match Rank:2
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CAGGTGCAGTGAC
GACAGGTGTN-----
 A C G T A C G T G T A C C G T A A C T G A C T G A G C T A T C G A G T C C G T A A T C G A C G T A T C G C G T A G T A C
C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A A C G T A C G T A C G T A C G T A C G T

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:3
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CAGGTGCAGTGAC--
-NAGGTCANTGACCT
 G T A C C G T A A C T G A C T G A G C T A T C G A G T C C G T A A T C G A C G T A T C G C G T A G T A C A C G T A C G T
A C G T T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T

TCF4/MA0830.1/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CAGGTGCAGTGAC
NNCAGGTGCG-----
 A C G T A C G T G T A C C G T A A C T G A C T G A G C T A T C G A G T C C G T A A T C G A C G T A T C G C G T A G T A C
G C T A T A C G G A T C C G T A A T C G T A C G A C G T C T A G A G T C C T A G A C G T A C G T A C G T A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:5
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CAGGTGCAGTGAC
SDGCAGGTGCNS----
 A C G T A C G T A C G T G T A C C G T A A C T G A C T G A G C T A T C G A G T C C G T A A T C G A C G T A T C G C G T A G T A C
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T A C G T A C G T A C G T

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CAGGTGCAGTGAC
TCAGNGAGCGTGAC
 A C G T G T A C C G T A A C T G A C T G A G C T A T C G A G T C C G T A A T C G A C G T A T C G C G T A G T A C
A C G T T A G C T C G A A T C G T A C G T C A G C T G A A T C G A G T C C T A G G A C T C T A G C T G A T G A C

SNAI2/MA0745.1/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CAGGTGCAGTGAC
AACAGGTGT------
 A C G T A C G T G T A C C G T A A C T G A C T G A G C T A T C G A G T C C G T A A T C G A C G T A T C G C G T A G T A C
C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CAGGTGCAGTGAC---
NNNANTGCAGTGCNNTT
 A C G T G T A C C G T A A C T G A C T G A G C T A T C G A G T C C G T A A T C G A C G T A T C G C G T A G T A C A C G T A C G T A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CAGGTGCAGTGAC
NNCAGGTGNN-----
 A C G T A C G T G T A C C G T A A C T G A C T G A G C T A T C G A G T C C G T A A T C G A C G T A T C G C G T A G T A C
C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T A C G T A C G T A C G T A C G T

TCF3/MA0522.2/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CAGGTGCAGTGAC
NNCAGGTGTN-----
 A C G T A C G T G T A C C G T A A C T G A C T G A G C T A T C G A G T C C G T A A T C G A C G T A T C G C G T A G T A C
G T C A T C A G A G T C C G T A A T C G T A C G C G A T A C T G A G C T C A G T A C G T A C G T A C G T A C G T A C G T