Information for 3-MAGRTGGTGSCAG (Motif 2)

G T A C C G T A A C T G C T A G A C G T A C T G A C T G A C G T A C T G A T C G A G T C C G T A A C T G
Reverse Opposite:
G T A C A C G T A C T G A T C G A G T C C G T A A G T C A G T C C G T A A G T C A G T C A C G T A C T G
p-value:1e-27
log p-value:-6.268e+01
Information Content per bp:1.892
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.38%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets40.0 +/- 15.8bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:1
Score:0.68
Offset:2
Orientation:forward strand
Alignment:MAGRTGGTGSCAG-
--GGTGYTGACAGS
 G T A C C G T A A C T G C T A G A C G T A C T G A C T G A C G T A C T G A T C G A G T C C G T A A C T G A C G T
A C G T A C G T T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G

YY1(Zf)/Promoter/Homer

Match Rank:2
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-MAGRTGGTGSCAG
CAAGATGGCGGC--
 A C G T G T A C C G T A A C T G C T A G A C G T A C T G A C T G A C G T A C T G A T C G A G T C C G T A A C T G
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C A C G T A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:3
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--MAGRTGGTGSCAG
AACAGATGGT-----
 A C G T A C G T G T A C C G T A A C T G C T A G A C G T A C T G A C T G A C G T A C T G A T C G A G T C C G T A A C T G
T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T A C G T A C G T A C G T A C G T A C G T

FIGLA/MA0820.1/Jaspar

Match Rank:4
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--MAGRTGGTGSCAG
AACAGGTGNT-----
 A C G T A C G T G T A C C G T A A C T G C T A G A C G T A C T G A C T G A C G T A C T G A T C G A G T C C G T A A C T G
G C T A T G C A G T A C G C T A A T C G A T C G C A G T C T A G C A T G C G A T A C G T A C G T A C G T A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--MAGRTGGTGSCAG
AACAGATGGC-----
 A C G T A C G T G T A C C G T A A C T G C T A G A C G T A C T G A C T G A C G T A C T G A T C G A G T C C G T A A C T G
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T

TAL1::TCF3/MA0091.1/Jaspar

Match Rank:6
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--MAGRTGGTGSCAG
AACAGATGGTCN---
 A C G T A C G T G T A C C G T A A C T G C T A G A C G T A C T G A C T G A C G T A C T G A T C G A G T C C G T A A C T G
C G T A T G C A G T A C C G T A A C T G T G C A A C G T A T C G A C T G G A C T A T G C C A T G A C G T A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:7
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:MAGRTGGTGSCAG--
-----VBTGWCAGCB
 G T A C C G T A A C T G C T A G A C G T A C T G A C T G A C G T A C T G A T C G A G T C C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.61
Offset:4
Orientation:forward strand
Alignment:MAGRTGGTGSCAG---
----AGGTGHCAGACA
 G T A C C G T A A C T G C T A G A C G T A C T G A C T G A C G T A C T G A T C G A G T C C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:9
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:MAGRTGGTGSCAG----
----AGGTGNCAGACAG
 G T A C C G T A A C T G C T A G A C G T A C T G A C T G A C G T A C T G A T C G A G T C C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:10
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----MAGRTGGTGSCAG
AAGGCCAGATGGTCCGG-
 A C G T A C G T A C G T A C G T A C G T G T A C C G T A A C T G C T A G A C G T A C T G A C T G A C G T A C T G A T C G A G T C C G T A A C T G
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G A C G T