Information for 9-CCCKCCACAGGGG (Motif 10)

A G T C A G T C A G T C A C G T G T A C G T A C C G T A A G T C C G T A C T A G A C T G A C T G A C T G
Reverse Opposite:
A G T C A G T C A G T C A G T C C G A T A C T G A C G T A C T G A C T G G T C A T A C G C T A G A C T G
p-value:1e-8
log p-value:-2.041e+01
Information Content per bp:1.836
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif6.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets39.5 +/- 19.8bp
Average Position of motif in Background63.0 +/- 32.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.67
Offset:2
Orientation:forward strand
Alignment:CCCKCCACAGGGG-
--GTCCCCAGGGGA
 A G T C A G T C A G T C A C G T G T A C G T A C C G T A A G T C C G T A C T A G A C T G A C T G A C T G A C G T
A C G T A C G T C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A

SCRT1/MA0743.1/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CCCKCCACAGGGG---
-GAGCAACAGGTGGTT
 A G T C A G T C A G T C A C G T G T A C G T A C C G T A A G T C C G T A C T A G A C T G A C T G A C T G A C G T A C G T A C G T
A C G T T C A G G C T A A C T G G A T C G T C A C G T A G T A C C G T A C T A G A C T G A G C T C A T G A C T G A G C T G A C T

SCRT2/MA0744.1/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CCCKCCACAGGGG-
-ATGCAACAGGTGG
 A G T C A G T C A G T C A C G T G T A C G T A C C G T A A G T C C G T A C T A G A C T G A C T G A C T G A C G T
A C G T T C G A G C A T A C T G G T A C T G C A C G T A G T A C G T C A T C A G A T C G G C A T C A T G A T C G

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:4
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CCCKCCACAGGGG------
--ATCCACAGGTGCGAAAA
 A G T C A G T C A G T C A C G T G T A C G T A C C G T A A G T C C G T A C T A G A C T G A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T C G A A C G T G T A C G T A C T G C A G T A C G T C A A T C G T A C G A G C T A C T G A G T C C T A G T C G A C G T A G T C A C G T A

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:CCCKCCACAGGGG
-----CACAGN--
 A G T C A G T C A G T C A C G T G T A C G T A C C G T A A G T C C G T A C T A G A C T G A C T G A C T G
A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:6
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:CCCKCCACAGGGG
-----AACAAAGG
 A G T C A G T C A G T C A C G T G T A C G T A C C G T A A G T C C G T A C T A G A C T G A C T G A C T G
A C G T A C G T A C G T A C G T A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G

PB0128.1_Gcm1_2/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CCCKCCACAGGGG-----
-TGCGCATAGGGGAGGAG
 A G T C A G T C A G T C A C G T G T A C G T A C C G T A A G T C C G T A C T A G A C T G A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C A T G A T G C T A C G G T A C T C G A A G C T T C G A C A T G A C T G A C T G A C T G T C G A A T C G T C A G G T C A A C T G

ZIC4/MA0751.1/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CCCKCCACAGGGG---
-NCNCAGCGGGGGGTC
 A G T C A G T C A G T C A C G T G T A C G T A C C G T A A G T C C G T A C T A G A C T G A C T G A C T G A C G T A C G T A C G T
A C G T C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C

ZIC1/MA0696.1/Jaspar

Match Rank:9
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CCCKCCACAGGGG---
--CACAGCGGGGGGTC
 A G T C A G T C A G T C A C G T G T A C G T A C C G T A A G T C C G T A C T A G A C T G A C T G A C T G A C G T A C G T A C G T
A C G T A C G T T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C

FIGLA/MA0820.1/Jaspar

Match Rank:10
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:CCCKCCACAGGGG--
-----AACAGGTGNT
 A G T C A G T C A G T C A C G T G T A C G T A C C G T A A G T C C G T A C T A G A C T G A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A T G C A G T A C G C T A A T C G A T C G C A G T C T A G C A T G C G A T