Information for 4-TCCAGTAGMK (Motif 6)

A C G T A G T C A G T C G T C A A T C G A C G T C G T A A T C G G T C A A C T G
Reverse Opposite:
T G A C C A G T A T G C C G A T G T C A A T G C A C G T A C T G T C A G T G C A
p-value:1e-10
log p-value:-2.422e+01
Information Content per bp:1.756
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.24%
Number of Background Sequences with motif134.8
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets51.3 +/- 30.8bp
Average Position of motif in Background48.4 +/- 31.2bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0051.1_Osr2_1/Jaspar

Match Rank:1
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---TCCAGTAGMK---
ATGTACAGTAGCAAAG
 A C G T A C G T A C G T A C G T A G T C A G T C G T C A A T C G A C G T C G T A A T C G G T C A A C T G A C G T A C G T A C G T
G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G

PB0050.1_Osr1_1/Jaspar

Match Rank:2
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---TCCAGTAGMK---
ATTTACAGTAGCAAAA
 A C G T A C G T A C G T A C G T A G T C A G T C G T C A A T C G A C G T C G T A A T C G G T C A A C T G A C G T A C G T A C G T
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A

PB0154.1_Osr1_2/Jaspar

Match Rank:3
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TCCAGTAGMK---
NNNTTAGGTAGCNTNT
 A C G T A C G T A C G T A C G T A G T C A G T C G T C A A T C G A C G T C G T A A T C G G T C A A C T G A C G T A C G T A C G T
A C T G C A G T G C T A C A G T A G C T C G T A C T A G A C T G C G A T C T G A C T A G A G T C C T G A C G A T C T A G G A C T

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TCCAGTAGMK
BCMATTAG--
 A C G T A G T C A G T C G T C A A T C G A C G T C G T A A T C G G T C A A C T G
A C T G A G T C G T C A G T C A A C G T A G C T C G T A T C A G A C G T A C G T

PB0155.1_Osr2_2/Jaspar

Match Rank:5
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TCCAGTAGMK---
NNTGTAGGTAGCANNT
 A C G T A C G T A C G T A C G T A G T C A G T C G T C A A T C G A C G T C G T A A T C G G T C A A C T G A C G T A C G T A C G T
A C T G C T A G C G A T C A T G A G C T C G T A C T A G A C T G C G A T C T G A T A C G A G T C C T G A C T G A C T A G G A C T

CTCF/MA0139.1/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TCCAGTAGMK-------
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T A G T C A G T C G T C A A T C G A C G T C G T A A T C G G T C A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

PH0111.1_Nkx2-2/Jaspar

Match Rank:7
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----TCCAGTAGMK--
NANTTTCAAGTGGTTAN
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C G T C A A T C G A C G T C G T A A T C G G T C A A C T G A C G T A C G T
G C T A T G C A G C A T G C A T A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G A T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TCCAGTAGMK--------
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T A G T C A G T C G T C A A T C G A C G T C G T A A T C G G T C A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:9
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----TCCAGTAGMK--
NNNANTGCAGTGCNNTT
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C G T C A A T C G A C G T C G T A A T C G G T C A A C T G A C G T A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

PH0171.1_Nkx2-1/Jaspar

Match Rank:10
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----TCCAGTAGMK--
AANTTCAAGTGGCTTN
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C G T C A A T C G A C G T C G T A A T C G G T C A A C T G A C G T A C G T
C G T A C G T A C A G T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G T A G C G A C T A C G T T C G A