Information for 9-AGAGCCGGGCGCC (Motif 5)

G T C A A T C G C T G A A C T G A G T C A G T C A C T G A T C G A C T G G T A C A C T G A T G C A T G C
Reverse Opposite:
A T C G A T C G A G T C A C T G A G T C A T G C A G T C T C A G A C T G A G T C A G C T A T G C A C G T
p-value:1e-10
log p-value:-2.500e+01
Information Content per bp:1.812
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.12%
Number of Background Sequences with motif16.2
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets57.8 +/- 22.4bp
Average Position of motif in Background43.7 +/- 30.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0008.1_E2F2_1/Jaspar

Match Rank:1
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:AGAGCCGGGCGCC-----
---NTCGCGCGCCTTNNN
 G T C A A T C G C T G A A C T G A G T C A G T C A C T G A T C G A C T G G T A C A C T G A T G C A T G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C G A T A T G C C T A G T A G C A T C G A T G C A C T G A T G C A T G C G A C T C G A T G C A T C G T A A G C T

PB0095.1_Zfp161_1/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AGAGCCGGGCGCC---
NCANGCGCGCGCGCCA
 G T C A A T C G C T G A A C T G A G T C A G T C A C T G A T C G A C T G G T A C A C T G A T G C A T G C A C G T A C G T A C G T
G C A T G A T C C T G A C T A G C T A G G A T C T C A G G A T C C T A G A G T C C T A G A G T C T A C G G A T C G A T C G T C A

POL006.1_BREu/Jaspar

Match Rank:3
Score:0.61
Offset:5
Orientation:forward strand
Alignment:AGAGCCGGGCGCC
-----AGCGCGCC
 G T C A A T C G C T G A A C T G A G T C A G T C A C T G A T C G A C T G G T A C A C T G A T G C A T G C
A C G T A C G T A C G T A C G T A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C

PB0009.1_E2F3_1/Jaspar

Match Rank:4
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:AGAGCCGGGCGCC-----
---ANCGCGCGCCCTTNN
 G T C A A T C G C T G A A C T G A G T C A G T C A C T G A T C G A C T G G T A C A C T G A T G C A T G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C G A T T A G C C T A G T A G C A T C G A T G C A C T G A G T C A T G C G A T C C G A T G C A T C G T A A G C T

PB0199.1_Zfp161_2/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-AGAGCCGGGCGCC
NNGCNCTGCGCGGC
 A C G T G T C A A T C G C T G A A C T G A G T C A G T C A C T G A T C G A C T G G T A C A C T G A T G C A T G C
T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C

Sp1(Zf)/Promoter/Homer

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-AGAGCCGGGCGCC
GGGGGCGGGGCC--
 A C G T G T C A A T C G C T G A A C T G A G T C A G T C A C T G A T C G A C T G G T A C A C T G A T G C A T G C
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T A C G T

ZIC1/MA0696.1/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-AGAGCCGGGCGCC
CACAGCGGGGGGTC
 A C G T G T C A A T C G C T G A A C T G A G T C A G T C A C T G A T C G A C T G G T A C A C T G A T G C A T G C
T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:8
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--AGAGCCGGGCGCC
DCHCAGCAGGRGGCC
 A C G T A C G T G T C A A T C G C T G A A C T G A G T C A G T C A C T G A T C G A C T G G T A C A C T G A T G C A T G C
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

PB0113.1_E2F3_2/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:AGAGCCGGGCGCC-----
-NNNNTTGGCGCCGANNN
 G T C A A T C G C T G A A C T G A G T C A G T C A C T G A T C G A C T G G T A C A C T G A T G C A T G C A C G T A C G T A C G T A C G T A C G T
A C G T T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:10
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:AGAGCCGGGCGCC-----
--NNNGGGGCGCCCCCNN
 G T C A A T C G C T G A A C T G A G T C A G T C A C T G A T C G A C T G G T A C A C T G A T G C A T G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A