Information for 3-GAACGGCGCC (Motif 2)

T A C G G C T A T C G A T A G C T C A G T A C G A T G C T A C G G T A C T G A C
Reverse Opposite:
A C T G C A T G A T G C T A C G A T G C A G T C A T C G A G C T C G A T A T G C
p-value:1e-16
log p-value:-3.778e+01
Information Content per bp:1.661
Number of Target Sequences with motif55.0
Percentage of Target Sequences with motif6.85%
Number of Background Sequences with motif845.8
Percentage of Background Sequences with motif1.75%
Average Position of motif in Targets54.4 +/- 24.6bp
Average Position of motif in Background48.8 +/- 29.8bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0113.1_E2F3_2/Jaspar

Match Rank:1
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-GAACGGCGCC------
AGCTCGGCGCCAAAAGC
 A C G T T A C G G C T A T C G A T A G C T C A G T A C G A T G C T A C G G T A C T G A C A C G T A C G T A C G T A C G T A C G T A C G T
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C

POL006.1_BREu/Jaspar

Match Rank:2
Score:0.73
Offset:2
Orientation:forward strand
Alignment:GAACGGCGCC
--AGCGCGCC
 T A C G G C T A T C G A T A G C T C A G T A C G A T G C T A C G G T A C T G A C
A C G T A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C

PB0112.1_E2F2_2/Jaspar

Match Rank:3
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-GAACGGCGCC------
CCTTCGGCGCCAAAAGG
 A C G T T A C G G C T A T C G A T A G C T C A G T A C G A T G C T A C G G T A C T G A C A C G T A C G T A C G T A C G T A C G T A C G T
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G

E2F1/MA0024.3/Jaspar

Match Rank:4
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GAACGGCGCC---
-TTTGGCGCCAAA
 T A C G G C T A T C G A T A G C T C A G T A C G A T G C T A C G G T A C T G A C A C G T A C G T A C G T
A C G T G C A T C G A T C G A T T A C G A T C G A G T C A T C G T A G C A G T C G T C A G C T A C G T A

E2F3/MA0469.2/Jaspar

Match Rank:5
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GAACGGCGCC------
AAAAATGGCGCCATTTTT
 A C G T A C G T T A C G G C T A T C G A T A G C T C A G T A C G A T G C T A C G G T A C T G A C A C G T A C G T A C G T A C G T A C G T A C G T
C T G A T C G A C G T A C G T A C G T A C A G T A T C G A T C G A G T C A T C G A G T C T A G C G T C A G C A T C G A T G C A T A G C T A G C T

E2F2/MA0864.1/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GAACGGCGCC-----
AAAATGGCGCCATTTT
 A C G T T A C G G C T A T C G A T A G C T C A G T A C G A T G C T A C G G T A C T G A C A C G T A C G T A C G T A C G T A C G T
C G T A C G T A C G T A C G T A C G A T A T C G A C T G A G T C A C T G A G T C A T G C G C T A G C A T C G A T C G A T G C A T

PB0052.1_Plagl1_1/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GAACGGCGCC-----
NNNGGGGCGCCCCCNN
 A C G T T A C G G C T A T C G A T A G C T C A G T A C G A T G C T A C G G T A C T G A C A C G T A C G T A C G T A C G T A C G T
A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A

PB0137.1_Irf3_2/Jaspar

Match Rank:8
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GAACGGCGCC-
GGAGAAAGGTGCGA
 A C G T A C G T A C G T T A C G G C T A T C G A T A G C T C A G T A C G A T G C T A C G G T A C T G A C A C G T
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GAACGGCGCC
TGGAACAGMA--
 A C G T A C G T T A C G G C T A T C G A T A G C T C A G T A C G A T G C T A C G G T A C T G A C
C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A A C G T A C G T

PB0009.1_E2F3_1/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GAACGGCGCC----
ATAAGGGCGCGCGAT
 A C G T T A C G G C T A T C G A T A G C T C A G T A C G A T G C T A C G G T A C T G A C A C G T A C G T A C G T A C G T
T C G A G C A T C G T A G C T A C T A G T A C G T A C G T A G C A T C G A T G C A T C G G A T C A T C G G C T A G C A T