Information for 5-AGCGAGGAGA (Motif 11)

C G T A A C T G A G T C A C T G C G T A A C T G A C T G C G T A A C T G C G T A
Reverse Opposite:
A C G T A G T C A C G T A G T C A G T C A C G T A G T C A C T G A G T C A C G T
p-value:1e-6
log p-value:-1.522e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.50%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets33.2 +/- 17.4bp
Average Position of motif in Background52.2 +/- 11.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:AGCGAGGAGA-
-GGGAGGACNG
 C G T A A C T G A G T C A C T G C G T A A C T G A C T G C G T A A C T G C G T A A C G T
A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.57
Offset:-9
Orientation:forward strand
Alignment:---------AGCGAGGAGA-
SMCAGTCWGAKGGAGGAGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G T C A C T G C G T A A C T G A C T G C G T A A C T G C G T A A C G T
A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-AGCGAGGAGA
CAGCC------
 A C G T C G T A A C T G A G T C A C T G C G T A A C T G A C T G C G T A A C T G C G T A
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T

MZF1/MA0056.1/Jaspar

Match Rank:4
Score:0.54
Offset:2
Orientation:forward strand
Alignment:AGCGAGGAGA
--TGGGGA--
 C G T A A C T G A G T C A C T G C G T A A C T G A C T G C G T A A C T G C G T A
A C G T A C G T A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T

PB0139.1_Irf5_2/Jaspar

Match Rank:5
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---AGCGAGGAGA--
TTGACCGAGAATTCC
 A C G T A C G T A C G T C G T A A C T G A G T C A C T G C G T A A C T G A C T G C G T A A C T G C G T A A C G T A C G T
A G C T G C A T C T A G C G T A G A C T G T A C C T A G C T G A A T C G C G T A C T G A G A C T G A C T A G T C T A G C

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:6
Score:0.51
Offset:2
Orientation:forward strand
Alignment:AGCGAGGAGA
--TRAGGTCA
 C G T A A C T G A G T C A C T G C G T A A C T G A C T G C G T A A C T G C G T A
A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A

ZNF354C/MA0130.1/Jaspar

Match Rank:7
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:AGCGAGGAGA
---GTGGAT-
 C G T A A C T G A G T C A C T G C G T A A C T G A C T G C G T A A C T G C G T A
A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T

PB0203.1_Zfp691_2/Jaspar

Match Rank:8
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-AGCGAGGAGA------
NTNNNAGGAGTCTCNTN
 A C G T C G T A A C T G A G T C A C T G C G T A A C T G A C T G C G T A A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A T C G C A G T A C G T G C T A C T A G C T G A A C T G A C T G C G T A A T C G A G C T G T A C G C A T T G A C T A C G G A C T G T C A

PB0107.1_Ascl2_2/Jaspar

Match Rank:9
Score:0.50
Offset:-5
Orientation:reverse strand
Alignment:-----AGCGAGGAGA-
NATNGGGNGGGGANAN
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G T C A C T G C G T A A C T G A C T G C G T A A C T G C G T A A C G T
C T G A T G C A G A C T T C G A C T A G C T A G T C A G G A T C A C T G C A T G A T C G C A T G G C T A A C G T C T G A T A C G

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:10
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---AGCGAGGAGA--
KGTTGCTAGGMAACA
 A C G T A C G T A C G T C G T A A C T G A G T C A C T G C G T A A C T G A C T G C G T A A C T G C G T A A C G T A C G T
C A T G A C T G A G C T C G A T C T A G A G T C A G C T C T G A C T A G A C T G T G C A C T G A T C G A A G T C G T C A