Information for 5-GCCACCCAATGAC (Motif 7)

A C T G A G T C A G T C C G T A A G T C A T G C A G T C T C G A C G T A A C G T A C T G C T G A G T A C
Reverse Opposite:
A C T G A G C T A G T C C G T A A C G T A C G T A C T G A T C G A C T G C G A T A C T G A C T G G T A C
p-value:1e-11
log p-value:-2.592e+01
Information Content per bp:1.925
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.99%
Number of Background Sequences with motif9.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets45.5 +/- 20.9bp
Average Position of motif in Background49.9 +/- 17.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:1
Score:0.59
Offset:7
Orientation:forward strand
Alignment:GCCACCCAATGAC
-------CATGAC
 A C T G A G T C A G T C C G T A A G T C A T G C A G T C T C G A C G T A A C G T A C T G C T G A G T A C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C T C G A A C G T C A T G C G T A A G T C

POL004.1_CCAAT-box/Jaspar

Match Rank:2
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GCCACCCAATGAC
ACTAGCCAATCA-
 A C T G A G T C A G T C C G T A A G T C A T G C A G T C T C G A C G T A A C G T A C T G C T G A G T A C
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:3
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GCCACCCAATGAC
---AGCCAATCGG
 A C T G A G T C A G T C C G T A A G T C A T G C A G T C T C G A C G T A A C G T A C T G C T G A G T A C
A C G T A C G T A C G T T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G

PB0167.1_Sox13_2/Jaspar

Match Rank:4
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----GCCACCCAATGAC
ANNTNCCCACCCANNAC-
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C C G T A A G T C A T G C A G T C T C G A C G T A A C G T A C T G C T G A G T A C
G T C A C G T A C G A T C G A T C G T A G T A C G T A C T A G C C G T A G A T C G T A C G T A C C T G A C T G A G A C T G C T A G A T C A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:5
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----GCCACCCAATGAC
ACTATGCCAACCTACC--
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C C G T A A G T C A T G C A G T C T C G A C G T A A C G T A C T G C T G A G T A C
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C A C G T A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----GCCACCCAATGAC--
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C C G T A A G T C A T G C A G T C T C G A C G T A A C G T A C T G C T G A G T A C A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

PH0026.1_Duxbl/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GCCACCCAATGAC-----
-CGACCCAATCAACGGTG
 A C T G A G T C A G T C C G T A A G T C A T G C A G T C T C G A C G T A A C G T A C T G C T G A G T A C A C G T A C G T A C G T A C G T A C G T
A C G T A G T C C T A G C T G A A G T C A G T C A G T C G T C A G T C A A G C T A G T C C G T A C T G A A G T C T A C G T C A G G C A T T A C G

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:8
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GCCACCCAATGAC----
-TGACCCAGTGACCTAC
 A C T G A G T C A G T C C G T A A G T C A T G C A G T C T C G A C G T A A C G T A C T G C T G A G T A C A C G T A C G T A C G T A C G T
A C G T G C A T T A C G G C T A A T G C G T A C A G T C T G C A T A C G C G A T C A T G T G C A T G A C G A T C G A C T T C G A T A G C

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:9
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GCCACCCAATGAC
GGACCACCCACG---
 A C G T A C G T A C T G A G T C A G T C C G T A A G T C A T G C A G T C T C G A C G T A A C G T A C T G C T G A G T A C
C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G A C G T A C G T A C G T

PB0092.1_Zbtb7b_1/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GCCACCCAATGAC
AAGCCCCCCAAAAAT
 A C G T A C G T A C T G A G T C A G T C C G T A A G T C A T G C A G T C T C G A C G T A A C G T A C T G C T G A G T A C
C T G A C T G A T C A G T A G C T A G C G T A C G T A C A G T C G A T C G C T A G C T A G C T A C G T A G T C A A G C T