Information for 6-AGGAGGAGCTGCA (Motif 9)

C T G A A C T G A C T G C G T A A C T G A T C G C G T A C T A G A G T C C G A T A C T G A G T C C G T A
Reverse Opposite:
C G A T A C T G A G T C C G T A A C T G A G T C C G A T A T G C A G T C A C G T A G T C A G T C A G C T
p-value:1e-10
log p-value:-2.430e+01
Information Content per bp:1.896
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif10.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets52.2 +/- 24.5bp
Average Position of motif in Background48.2 +/- 24.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0003.1_Ascl2_1/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-AGGAGGAGCTGCA---
NNNNAGCAGCTGCTGAN
 A C G T C T G A A C T G A C T G C G T A A C T G A T C G C G T A C T A G A G T C C G A T A C T G A G T C C G T A A C G T A C G T A C G T
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:AGGAGGAGCTGCA
GGGAGGACNG---
 C T G A A C T G A C T G C G T A A C T G A T C G C G T A C T A G A G T C C G A T A C T G A G T C C G T A
C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G A C G T A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:3
Score:0.63
Offset:3
Orientation:forward strand
Alignment:AGGAGGAGCTGCA
---AGCAGCTGCT
 C T G A A C T G A C T G C G T A A C T G A T C G C G T A C T A G A G T C C G A T A C T G A G T C C G T A
A C G T A C G T A C G T T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:4
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AGGAGGAGCTGCA
-NNAGCAGCTGCT
 C T G A A C T G A C T G C G T A A C T G A T C G C G T A C T A G A G T C C G A T A C T G A G T C C G T A
A C G T T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T

Myod1/MA0499.1/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AGGAGGAGCTGCA
NGNGACAGCTGCN
 C T G A A C T G A C T G C G T A A C T G A T C G C G T A C T A G A G T C C G A T A C T G A G T C C G T A
T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A

POL003.1_GC-box/Jaspar

Match Rank:6
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---AGGAGGAGCTGCA
AGGGGGCGGGGCTG--
 A C G T A C G T A C G T C T G A A C T G A C T G C G T A A C T G A T C G C G T A C T A G A G T C C G A T A C T G A G T C C G T A
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G A C G T A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:7
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AGGAGGAGCTGCA
ADGGYAGYAGCATCT
 A C G T A C G T C T G A A C T G A C T G C G T A A C T G A T C G C G T A C T A G A G T C C G A T A C T G A G T C C G T A
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T

NHLH1/MA0048.2/Jaspar

Match Rank:8
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:AGGAGGAGCTGCA
---CGCAGCTGCG
 C T G A A C T G A C T G C G T A A C T G A T C G C G T A C T A G A G T C C G A T A C T G A G T C C G T A
A C G T A C G T A C G T T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:AGGAGGAGCTGCA
--CAGCAGCTGN-
 C T G A A C T G A C T G C G T A A C T G A T C G C G T A C T A G A G T C C G A T A C T G A G T C C G T A
A C G T A C G T T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:10
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---AGGAGGAGCTGCA
RGKGGGCGGAGC----
 A C G T A C G T A C G T C T G A A C T G A C T G C G T A A C T G A T C G C G T A C T A G A G T C C G A T A C T G A G T C C G T A
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T A C G T A C G T A C G T