Information for 4-AACATATTAG (Motif 3)

C G T A C G T A A G T C C G T A G A C T G T C A C G A T C G A T C T G A A C T G
Reverse Opposite:
A G T C A G C T C G T A C G T A A C G T C T G A C G A T A C T G C G A T A C G T
p-value:1e-13
log p-value:-3.055e+01
Information Content per bp:1.843
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets35.3 +/- 29.0bp
Average Position of motif in Background32.3 +/- 11.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gata1/MA0035.3/Jaspar

Match Rank:1
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AACATATTAG--
-ANAGATAAGAA
 C G T A C G T A A G T C C G T A G A C T G T C A C G A T C G A T C T G A A C T G A C G T A C G T
A C G T C T G A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T C A G T C G A T C G A

PB0016.1_Foxj1_1/Jaspar

Match Rank:2
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------AACATATTAG
AAAGTAAACAAAAATT
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G T C C G T A G A C T G T C A C G A T C G A T C T G A A C T G
G C T A C G A T G C T A C T A G G A C T G T C A G C T A C G T A G A T C C G T A G T C A C G T A G T C A C G T A C A G T C A G T

PH0092.1_Lhx2/Jaspar

Match Rank:3
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--AACATATTAG-----
TAAACTAATTAGTGAAC
 A C G T A C G T C G T A C G T A A G T C C G T A G A C T G T C A C G A T C G A T C T G A A C T G A C G T A C G T A C G T A C G T A C G T
C G A T T G C A G T C A T C G A G A T C G A C T G T C A C T G A A G C T A C G T C T G A C T A G A G C T C A T G G T C A G T C A A T G C

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:4
Score:0.58
Offset:2
Orientation:forward strand
Alignment:AACATATTAG--
--CAGATAAGGN
 C G T A C G T A A G T C C G T A G A C T G T C A C G A T C G A T C T G A A C T G A C G T A C G T
A C G T A C G T T A G C G C T A A C T G C G T A A C G T C G T A C G T A T A C G T C A G T C G A

PB0135.1_Hoxa3_2/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--AACATATTAG--
AAAAACCATTAAGG
 A C G T A C G T C G T A C G T A A G T C C G T A G A C T G T C A C G A T C G A T C T G A A C T G A C G T A C G T
T C G A G T C A C T G A G C T A C G T A T G A C A G T C T G C A C G A T G C A T C G T A C T G A A T C G T C A G

Gata4/MA0482.1/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AACATATTAG-
NNGAGATAAGA
 C G T A C G T A A G T C C G T A G A C T G T C A C G A T C G A T C T G A A C T G A C G T
T C A G C T A G T A C G C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A

PH0028.1_En1/Jaspar

Match Rank:7
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---AACATATTAG---
GCGAACTAATTAATGC
 A C G T A C G T A C G T C G T A C G T A A G T C C G T A G A C T G T C A C G A T C G A T C T G A A C T G A C G T A C G T A C G T
T C A G T A G C T A C G T G C A T G C A A G T C A G C T C T G A C T G A C G A T A C G T C T G A C T G A A C G T C T A G T A G C

VENTX/MA0724.1/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AACATATTAG
-ACCGATTAG
 C G T A C G T A A G T C C G T A G A C T G T C A C G A T C G A T C T G A A C T G
A C G T C G T A T G A C G A T C T C A G G T C A A C G T A C G T C G T A C T A G

PB0121.1_Foxj3_2/Jaspar

Match Rank:9
Score:0.57
Offset:-8
Orientation:forward strand
Alignment:--------AACATATTAG
AACACCAAAACAAAGGA-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G T C C G T A G A C T G T C A C G A T C G A T C T G A A C T G
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A A C G T

Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer

Match Rank:10
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--AACATATTAG
TAATYNRATTAR
 A C G T A C G T C G T A C G T A A G T C C G T A G A C T G T C A C G A T C G A T C T G A A C T G
G C A T C G T A C G T A G A C T A G C T G C A T T C G A T C G A A C G T G A C T C G T A C T A G