p-value: | 1e-6 |
log p-value: | -1.610e+01 |
Information Content per bp: | 1.672 |
Number of Target Sequences with motif | 19.0 |
Percentage of Target Sequences with motif | 2.19% |
Number of Background Sequences with motif | 228.9 |
Percentage of Background Sequences with motif | 0.49% |
Average Position of motif in Targets | 46.1 +/- 26.6bp |
Average Position of motif in Background | 50.5 +/- 28.4bp |
Strand Bias (log2 ratio + to - strand density) | 0.2 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer
Match Rank: | 1 |
Score: | 0.66 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GGGAGTTCGV NGGGGATTTCCC |
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REL/MA0101.1/Jaspar
Match Rank: | 2 |
Score: | 0.64 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GGGAGTTCGV GGGGATTTCC- |
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PB0149.1_Myb_2/Jaspar
Match Rank: | 3 |
Score: | 0.62 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----GGGAGTTCGV-- NNNTGGCAGTTGGTNN |
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RELA/MA0107.1/Jaspar
Match Rank: | 4 |
Score: | 0.61 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GGGAGTTCGV GGGAATTTCC- |
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MF0003.1_REL_class/Jaspar
Match Rank: | 5 |
Score: | 0.61 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GGGAGTTCGV GGGGATTTCC- |
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NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer
Match Rank: | 6 |
Score: | 0.60 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GGGAGTTCGV GGGAATTTCC |
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Myb/MA0100.2/Jaspar
Match Rank: | 7 |
Score: | 0.60 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GGGAGTTCGV TGGCAGTTGN- |
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PB0150.1_Mybl1_2/Jaspar
Match Rank: | 8 |
Score: | 0.59 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---GGGAGTTCGV-- CACGGCAGTTGGTNN |
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PB0140.1_Irf6_2/Jaspar
Match Rank: | 9 |
Score: | 0.59 |
Offset: | -6 |
Orientation: | reverse strand |
Alignment: | ------GGGAGTTCGV NNNACCGAGAGTNNN- |
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PB0139.1_Irf5_2/Jaspar
Match Rank: | 10 |
Score: | 0.58 |
Offset: | -6 |
Orientation: | forward strand |
Alignment: | ------GGGAGTTCGV TTGACCGAGAATTCC- |
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