Information for 5-TGGCTGCAGACGG (Motif 5)

A C G T A T C G A C T G A G T C A C G T A C T G A G T C C G T A A C T G C G T A A G T C A C T G A C T G
Reverse Opposite:
G T A C A G T C A C T G A C G T A G T C A C G T A C T G A G T C C G T A C T A G G T A C A T G C C G T A
p-value:1e-13
log p-value:-3.091e+01
Information Content per bp:1.939
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.3 +/- 26.8bp
Average Position of motif in Background77.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.68
Offset:5
Orientation:reverse strand
Alignment:TGGCTGCAGACGG--
-----CCAGACRSVB
 A C G T A T C G A C T G A G T C A C G T A C T G A G T C C G T A A C T G C G T A A G T C A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:TGGCTGCAGACGG
-----CCAGACAG
 A C G T A T C G A C T G A G T C A C G T A C T G A G T C C G T A A C T G C G T A A G T C A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

PB0044.1_Mtf1_1/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TGGCTGCAGACGG---
NNTTTGCACACGGCCC
 A C G T A T C G A C T G A G T C A C G T A C T G A G T C C G T A A C T G C G T A A G T C A C T G A C T G A C G T A C G T A C G T
C G A T G A C T C A G T A C G T G A C T A C T G G A T C C T G A A G T C G C T A G A T C A C T G C T A G G A T C T A G C G T A C

MTF1/MA0863.1/Jaspar

Match Rank:4
Score:0.58
Offset:2
Orientation:forward strand
Alignment:TGGCTGCAGACGG---
--TTTGCACACGGCAC
 A C G T A T C G A C T G A G T C A C G T A C T G A G T C C G T A A C T G C G T A A G T C A C T G A C T G A C G T A C G T A C G T
A C G T A C G T C A G T A C G T G A C T T C A G G T A C C G T A T A G C G T C A A G T C C A T G C A T G A G T C T G C A G A T C

ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----TGGCTGCAGACGG
AGAGRRACAGCWGAC--
 A C G T A C G T A C G T A C G T A C G T A T C G A C T G A G T C A C G T A C T G A G T C C G T A A C T G C G T A A G T C A C T G A C T G
T C G A C T A G C G T A C T A G C T G A T C A G C G T A A G T C C G T A T C A G T G A C G C A T A C T G C G T A A G T C A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TGGCTGCAGACGG
TWGTCTGV------
 A C G T A C G T A T C G A C T G A G T C A C G T A C T G A G T C C G T A A C T G C G T A A G T C A C T G A C T G
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

HINFP/MA0131.2/Jaspar

Match Rank:7
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:TGGCTGCAGACGG--
---NCGCGGACGTTG
 A C G T A T C G A C T G A G T C A C G T A C T G A G T C C G T A A C T G C G T A A G T C A C T G A C T G A C G T A C G T
A C G T A C G T A C G T T G A C G T A C T A C G T A G C C T A G A T C G C G T A T A G C T A C G A G C T A C G T T A C G

PB0060.1_Smad3_1/Jaspar

Match Rank:8
Score:0.54
Offset:0
Orientation:forward strand
Alignment:TGGCTGCAGACGG----
CAAATCCAGACATCACA
 A C G T A T C G A C T G A G T C A C G T A C T G A G T C C G T A A C T G C G T A A G T C A C T G A C T G A C G T A C G T A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:9
Score:0.54
Offset:4
Orientation:forward strand
Alignment:TGGCTGCAGACGG-
----TGCTGACTCA
 A C G T A T C G A C T G A G T C A C G T A C T G A G T C C G T A A C T G C G T A A G T C A C T G A C T G A C G T
A C G T A C G T A C G T A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A

NRL/MA0842.1/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:forward strand
Alignment:TGGCTGCAGACGG
AATTTGCTGAC--
 A C G T A T C G A C T G A G T C A C G T A C T G A G T C C G T A A C T G C G T A A G T C A C T G A C T G
C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C A C G T A C G T