Information for 2-RCTGAGTCAT (Motif 2)

C T A G T A G C A C G T A C T G C G T A A T C G A C G T A G T C C G T A A G C T
Reverse Opposite:
T C G A A C G T A C T G C G T A A T G C A C G T A G T C C G T A A T C G G A T C
p-value:1e-22
log p-value:-5.169e+01
Information Content per bp:1.810
Number of Target Sequences with motif42.0
Percentage of Target Sequences with motif5.02%
Number of Background Sequences with motif321.5
Percentage of Background Sequences with motif0.67%
Average Position of motif in Targets51.5 +/- 27.1bp
Average Position of motif in Background51.2 +/- 26.1bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOS/MA0476.1/Jaspar

Match Rank:1
Score:0.97
Offset:0
Orientation:forward strand
Alignment:RCTGAGTCAT-
TGTGACTCATT
 C T A G T A G C A C G T A C T G C G T A A T C G A C G T A G T C C G T A A G C T A C G T
C A G T T A C G A C G T A C T G C G T A A T G C A C G T A G T C C G T A A G C T A G C T

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.96
Offset:0
Orientation:reverse strand
Alignment:RCTGAGTCAT
GATGAGTCAT
 C T A G T A G C A C G T A C T G C G T A A T C G A C G T A G T C C G T A A G C T
T A C G T G C A C G A T C A T G C G T A A T C G C G A T G T A C C G T A A G C T

Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer

Match Rank:3
Score:0.96
Offset:-1
Orientation:reverse strand
Alignment:-RCTGAGTCAT-
NNVTGASTCATN
 A C G T C T A G T A G C A C G T A C T G C G T A A T C G A C G T A G T C C G T A A G C T A C G T
A T C G C T A G T G C A C G A T A C T G C T G A A T G C G C A T T G A C G C T A A G C T G A T C

Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.96
Offset:-1
Orientation:reverse strand
Alignment:-RCTGAGTCAT-
NNATGAGTCATN
 A C G T C T A G T A G C A C G T A C T G C G T A A T C G A C G T A G T C C G T A A G C T A C G T
C A T G C T A G T C G A A C G T A C T G C G T A A T C G A C G T G T A C C G T A A G C T G A T C

Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer

Match Rank:5
Score:0.96
Offset:-1
Orientation:reverse strand
Alignment:-RCTGAGTCAT-
NDATGASTCATH
 A C G T C T A G T A G C A C G T A C T G C G T A A T C G A C G T A G T C C G T A A G C T A C G T
C A T G C T A G T C G A A C G T A C T G C G T A T A C G A C G T G T A C C G T A A G C T G A T C

BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer

Match Rank:6
Score:0.96
Offset:0
Orientation:forward strand
Alignment:RCTGAGTCAT
DATGASTCAT
 C T A G T A G C A C G T A C T G C G T A A T C G A C G T A G T C C G T A A G C T
C A G T T G C A A C G T A C T G C G T A A T C G C G A T T G A C C G T A A C G T

FOSL2/MA0478.1/Jaspar

Match Rank:7
Score:0.95
Offset:1
Orientation:reverse strand
Alignment:RCTGAGTCAT--
-NTGAGTCATCN
 C T A G T A G C A C G T A C T G C G T A A T C G A C G T A G T C C G T A A G C T A C G T A C G T
A C G T T G C A A C G T A C T G C G T A T A C G A G C T A G T C C G T A G A C T A G T C T G A C

JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer

Match Rank:8
Score:0.95
Offset:0
Orientation:forward strand
Alignment:RCTGAGTCAT
RATGASTCAT
 C T A G T A G C A C G T A C T G C G T A A T C G A C G T A G T C C G T A A G C T
C T A G T C G A G C A T C A T G G C T A T A G C C G A T G T A C C T G A A G C T

JUNB/MA0490.1/Jaspar

Match Rank:9
Score:0.95
Offset:1
Orientation:reverse strand
Alignment:RCTGAGTCAT--
-ATGAGTCATCN
 C T A G T A G C A C G T A C T G C G T A A T C G A C G T A G T C C G T A A G C T A C G T A C G T
A C G T T G C A A C G T A C T G C G T A T A C G A C G T A G T C C G T A A G C T G A T C G T A C

Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer

Match Rank:10
Score:0.95
Offset:0
Orientation:reverse strand
Alignment:RCTGAGTCAT--
GATGAGTCATCC
 C T A G T A G C A C G T A C T G C G T A A T C G A C G T A G T C C G T A A G C T A C G T A C G T
C T A G T C G A G A C T A C T G C G T A A T C G C G A T T G A C C G T A A G C T G A T C G T A C