Information for 10-GAAAMTTWARTTY (Motif 16)

A T C G C G T A C G T A C T G A G T A C A C G T A C G T C G T A C G T A C T A G A G C T A C G T A G C T
Reverse Opposite:
C T G A C G T A C T G A A G T C A C G T C G A T C G T A C G T A A C T G A G C T A C G T A C G T A T G C
p-value:1e-8
log p-value:-1.940e+01
Information Content per bp:1.870
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.5 +/- 31.1bp
Average Position of motif in Background54.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:1
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GAAAMTTWARTTY
GAAACTGAAACT-
 A T C G C G T A C G T A C T G A G T A C A C G T A C G T C G T A C G T A C T A G A G C T A C G T A G C T
T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T A C G T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:2
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GAAAMTTWARTTY
GAAAGTGAAAGT-
 A T C G C G T A C G T A C T G A G T A C A C G T A C G T C G T A C G T A C T A G A G C T A C G T A G C T
T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T A C G T

Lhx3/MA0135.1/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GAAAMTTWARTTY
GATTAATTAATTT-
 A C G T A T C G C G T A C G T A C T G A G T A C A C G T A C G T C G T A C G T A C T A G A G C T A C G T A G C T
T C A G C T G A G C A T C G A T C T G A C G T A A C G T C G A T C G T A C G T A C G A T A C G T G C A T A C G T

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:4
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GAAAMTTWARTTY--
---ACTTTCGTTTCT
 A T C G C G T A C G T A C T G A G T A C A C G T A C G T C G T A C G T A C T A G A G C T A C G T A G C T A C G T A C G T
A C G T A C G T A C G T T G C A A T G C A C G T A C G T A C G T A T G C C T A G A C G T A C G T A G C T G A T C A G C T

PROP1/MA0715.1/Jaspar

Match Rank:5
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GAAAMTTWARTTY
--TAATTAAATTA
 A T C G C G T A C G T A C T G A G T A C A C G T A C G T C G T A C G T A C T A G A G C T A C G T A G C T
A C G T A C G T G C A T C T G A C G T A G A C T C A G T G C T A C T G A C G T A A G C T C G A T C G T A

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GAAAMTTWARTTY
GAAAMTGAAACT-
 A T C G C G T A C G T A C T G A G T A C A C G T A C G T C G T A C G T A C T A G A G C T A C G T A G C T
C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T A C G T

IRF7/MA0772.1/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GAAAMTTWARTTY
ACGAAAGCGAAAGT-
 A C G T A C G T A T C G C G T A C G T A C T G A G T A C A C G T A C G T C G T A C G T A C T A G A G C T A C G T A G C T
G T C A T G A C A C T G T G C A C G T A G T C A T C A G G A T C C T A G G T C A T C G A G C T A T C A G G C A T A C G T

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GAAAMTTWARTTY
GWAAYHTGAKMC-
 A T C G C G T A C G T A C T G A G T A C A C G T A C G T C G T A C G T A C T A G A G C T A C G T A G C T
C T A G C G T A G T C A C G T A A G T C G A T C A G C T C T A G C G T A A C G T G T C A G A T C A C G T

PHOX2A/MA0713.1/Jaspar

Match Rank:9
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GAAAMTTWARTTY
--TAATTAAATTA
 A T C G C G T A C G T A C T G A G T A C A C G T A C G T C G T A C G T A C T A G A G C T A C G T A G C T
A C G T A C G T G C A T C G T A T C G A A G C T A G C T C T G A T C G A C T G A G A C T G A C T C G T A

PB0037.1_Isgf3g_1/Jaspar

Match Rank:10
Score:0.57
Offset:-7
Orientation:forward strand
Alignment:-------GAAAMTTWARTTY
CAAAATCGAAACTAA-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G C G T A C G T A C T G A G T A C A C G T A C G T C G T A C G T A C T A G A G C T A C G T A G C T
T G A C C T G A C T G A C G T A G C T A G C A T A G T C C T A G G T C A C G T A G C T A T A G C G A C T C G T A G C T A A C G T A C G T A C G T A C G T A C G T