Information for 9-CGCCAGAGGGCGA (Motif 14)

A G T C C T A G A T G C A T G C G T C A A C T G C T G A C T A G A T C G A C T G T A G C C T A G T G C A
Reverse Opposite:
A C G T A G T C A T C G A G T C A T G C A G T C A G C T A G T C A C G T T A C G A T C G A G T C A C T G
p-value:1e-10
log p-value:-2.343e+01
Information Content per bp:1.773
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif2.63%
Number of Background Sequences with motif212.6
Percentage of Background Sequences with motif0.44%
Average Position of motif in Targets38.9 +/- 25.6bp
Average Position of motif in Background51.1 +/- 31.2bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--CGCCAGAGGGCGA-----
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A G T C C T A G A T G C A T G C G T C A A C T G C T G A C T A G A T C G A C T G T A G C C T A G T G C A A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----CGCCAGAGGGCGA--
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T A C G T A G T C C T A G A T G C A T G C G T C A A C T G C T G A C T A G A T C G A C T G T A G C C T A G T G C A A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----CGCCAGAGGGCGA---
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T A C G T A G T C C T A G A T G C A T G C G T C A A C T G C T G A C T A G A T C G A C T G T A G C C T A G T G C A A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CGCCAGAGGGCGA
TGCCCNGGGGCA-
 A G T C C T A G A T G C A T G C G T C A A C T G C T G A C T A G A T C G A C T G T A G C C T A G T G C A
G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A A C G T

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CGCCAGAGGGCGA
TTGCCCTAGGGCAT
 A C G T A G T C C T A G A T G C A T G C G T C A A C T G C T G A C T A G A T C G A C T G T A G C C T A G T G C A
C G A T G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A C G A T

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CGCCAGAGGGCGA
CCGCCCAAGGGCAG
 A C G T A G T C C T A G A T G C A T G C G T C A A C T G C T G A C T A G A T C G A C T G T A G C C T A G T G C A
A T G C G A T C T C A G G T A C G A T C G A T C C G T A G C T A C T A G C T A G C A T G A G T C C G T A C T A G

ZBTB33/MA0527.1/Jaspar

Match Rank:7
Score:0.57
Offset:-7
Orientation:reverse strand
Alignment:-------CGCCAGAGGGCGA
NAGNTCTCGCGAGAN-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C T A G A T G C A T G C G T C A A C T G C T G A C T A G A T C G A C T G T A G C C T A G T G C A
T A G C T C G A T C A G T C G A A G C T T G A C A G C T A G T C C T A G G A T C A C T G C T G A A C T G T C G A T C A G A C G T A C G T A C G T A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:8
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CGCCAGAGGGCGA
-AACAGATGGC--
 A G T C C T A G A T G C A T G C G T C A A C T G C T G A C T A G A T C G A C T G T A G C C T A G T G C A
A C G T C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T

PB0114.1_Egr1_2/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CGCCAGAGGGCGA----
-TGCGGAGTGGGACTGG
 A G T C C T A G A T G C A T G C G T C A A C T G C T G A C T A G A T C G A C T G T A G C C T A G T G C A A C G T A C G T A C G T A C G T
A C G T A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G

PB0076.1_Sp4_1/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CGCCAGAGGGCGA----
NNNAAGGGGGCGGGNNN
 A G T C C T A G A T G C A T G C G T C A A C T G C T G A C T A G A T C G A C T G T A G C C T A G T G C A A C G T A C G T A C G T A C G T
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C