Motif Name	Consensus	P-value	Log P-value	q-value (Benjamini)	# of Target Sequences with Motif(of 844)	% of Target Sequences with Motif	# of Background Sequences with Motif(of 47987)	% of Background Sequences with Motif
HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer	TTCTAGAABNTTCTA	1e-47	-1.096e+02	0.0000	71.0	8.41%	374.3	0.78%
HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer	BSTTCTRGAABVTTCYAGAA	1e-42	-9.755e+01	0.0000	58.0	6.87%	263.8	0.55%
CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer	AYAGTGCCMYCTRGTGGCCA	1e-18	-4.166e+01	0.0000	34.0	4.03%	260.5	0.55%
JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer	RATGASTCAT	1e-17	-4.094e+01	0.0000	57.0	6.75%	789.4	1.65%
Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer	DATGASTCATHN	1e-15	-3.519e+01	0.0000	59.0	6.99%	959.4	2.01%
Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer	NATGASTCABNN	1e-14	-3.438e+01	0.0000	39.0	4.62%	445.8	0.93%
AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	VTGACTCATC	1e-14	-3.298e+01	0.0000	62.0	7.35%	1101.4	2.31%
Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer	NNATGASTCATH	1e-14	-3.278e+01	0.0000	52.0	6.16%	810.1	1.70%
BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer	DATGASTCAT	1e-14	-3.269e+01	0.0000	57.0	6.75%	958.0	2.01%
Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer	GGATGACTCATC	1e-13	-3.164e+01	0.0000	47.0	5.57%	694.2	1.46%
BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer	CNNBRGCGCCCCCTGSTGGC	1e-12	-2.873e+01	0.0000	42.0	4.98%	615.0	1.29%
Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	GATGASTCATCN	1e-10	-2.501e+01	0.0000	28.0	3.32%	321.9	0.67%
Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer	HTGCTGAGTCAT	1e-5	-1.366e+01	0.0000	9.0	1.07%	57.4	0.12%
KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer	DGGGYGKGGC	1e-5	-1.342e+01	0.0000	118.0	13.98%	4294.4	9.00%
TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer	YCWGGAATGY	1e-5	-1.340e+01	0.0000	49.0	5.81%	1316.3	2.76%
Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer	HACTTCCGGY	1e-5	-1.314e+01	0.0000	63.0	7.46%	1891.0	3.96%
Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer	TGCTGAGTCA	1e-5	-1.230e+01	0.0001	18.0	2.13%	281.3	0.59%
ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer	NGNTCTAGAACCNGV	1e-5	-1.225e+01	0.0001	30.0	3.55%	663.0	1.39%
Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer	AWWNTGCTGAGTCAT	1e-5	-1.225e+01	0.0001	9.0	1.07%	68.6	0.14%
GFY-Staf(?,Zf)/Promoter/Homer	RACTACAATTCCCAGAAKGC	1e-5	-1.202e+01	0.0001	13.0	1.54%	155.6	0.33%
Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer	NRYTTCCGGY	1e-5	-1.202e+01	0.0001	62.0	7.35%	1918.9	4.02%
Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer	RGKGGGCGGAGC	1e-5	-1.194e+01	0.0001	103.0	12.20%	3736.7	7.83%
CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	ATTGCGCAAC	1e-5	-1.182e+01	0.0001	41.0	4.86%	1083.1	2.27%
NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer	GATGACTCAGCA	1e-4	-1.147e+01	0.0002	9.0	1.07%	75.8	0.16%
TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer	CCWGGAATGY	1e-4	-1.057e+01	0.0004	55.0	6.52%	1717.9	3.60%
ETS(ETS)/Promoter/Homer	AACCGGAAGT	1e-4	-1.052e+01	0.0004	37.0	4.38%	991.7	2.08%
KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer	NRGCCCCRCCCHBNN	1e-4	-1.038e+01	0.0004	50.0	5.92%	1520.6	3.19%
Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer	NRYTTCCGGH	1e-4	-1.004e+01	0.0006	88.0	10.43%	3219.8	6.75%
TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer	CCWGGAATGY	1e-4	-9.810e+00	0.0007	37.0	4.38%	1026.8	2.15%
CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	DRTGTTGCAA	1e-4	-9.705e+00	0.0007	41.0	4.86%	1191.6	2.50%
GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer	RACCGGAAGT	1e-4	-9.429e+00	0.0009	67.0	7.94%	2320.9	4.87%
GFX(?)/Promoter/Homer	ATTCTCGCGAGA	1e-4	-9.407e+00	0.0009	6.0	0.71%	39.8	0.08%
HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer	RTTATGYAAB	1e-3	-9.197e+00	0.0011	42.0	4.98%	1261.7	2.64%
Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer	MTGATGCAAT	1e-3	-8.950e+00	0.0014	20.0	2.37%	432.8	0.91%
KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer	RGKGGGCGKGGC	1e-3	-8.921e+00	0.0014	145.0	17.18%	6088.0	12.76%
ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer	GGVTCTCGCGAGAAC	1e-3	-8.767e+00	0.0016	11.0	1.30%	159.0	0.33%
ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer	AACCGGAAGT	1e-3	-8.427e+00	0.0022	90.0	10.66%	3472.2	7.28%
Sp1(Zf)/Promoter/Homer	GGCCCCGCCCCC	1e-3	-8.371e+00	0.0022	45.0	5.33%	1439.2	3.02%
ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer	AVCCGGAAGT	1e-3	-8.368e+00	0.0022	50.0	5.92%	1654.8	3.47%
Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer	GATGACGTCA	1e-3	-7.959e+00	0.0032	38.0	4.50%	1171.5	2.46%
Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer	RACTACAACTCCCAGVAKGC	1e-3	-7.594e+00	0.0045	9.0	1.07%	126.8	0.27%
NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer	WGGGGATTTCCC	1e-3	-7.448e+00	0.0051	35.0	4.15%	1078.1	2.26%
NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer	YTGCCAAG	1e-3	-7.447e+00	0.0051	95.0	11.26%	3822.3	8.01%
CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer	TGCAGTTCCMVNWRTGGCCA	1e-3	-7.426e+00	0.0051	3.0	0.36%	9.9	0.02%
Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer	NGRTGACGTCAY	1e-3	-7.395e+00	0.0051	27.0	3.20%	756.5	1.59%
Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer	AGGTGTCA	1e-3	-7.217e+00	0.0058	152.0	18.01%	6690.5	14.03%
NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer	GGAAATTCCC	1e-2	-6.836e+00	0.0083	8.0	0.95%	113.1	0.24%
ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer	ACAGGAAGTG	1e-2	-6.709e+00	0.0093	95.0	11.26%	3914.8	8.21%
MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer	GCTGASTCAGCA	1e-2	-6.600e+00	0.0101	14.0	1.66%	306.0	0.64%
NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer	CYTGGCABNSTGCCAR	1e-2	-6.140e+00	0.0157	26.0	3.08%	785.7	1.65%
MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer	WNTGCTGASTCAGCANWTTY	1e-2	-6.109e+00	0.0159	20.0	2.37%	547.0	1.15%
ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer	ACAGGAAGTG	1e-2	-5.841e+00	0.0203	66.0	7.82%	2618.6	5.49%
Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer	CTTCCGGGAA	1e-2	-5.722e+00	0.0225	35.0	4.15%	1198.2	2.51%
USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer	SGTCACGTGR	1e-2	-5.646e+00	0.0238	28.0	3.32%	901.0	1.89%
GFY(?)/Promoter/Homer	ACTACAATTCCC	1e-2	-5.587e+00	0.0248	10.0	1.18%	202.5	0.42%
MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer	GGCVGTTR	1e-2	-5.319e+00	0.0318	87.0	10.31%	3710.2	7.78%
Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer	GCCACACCCA	1e-2	-5.304e+00	0.0318	29.0	3.44%	967.1	2.03%
ZNF136(Zf)/HEK293-ZNF136.GFP-ChIP-Seq(GSE58341)/Homer	YTKGATAHAGTATTCTWGGTNGGCA	1e-2	-5.301e+00	0.0318	6.0	0.71%	87.9	0.18%
EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer	VACAGGAAAT	1e-2	-5.085e+00	0.0382	38.0	4.50%	1386.4	2.91%
Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer	NNNCTTTCCAGGAAA	1e-2	-5.054e+00	0.0387	68.0	8.06%	2811.7	5.89%
Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)	NNAYTTCCTGHN	1e-2	-5.036e+00	0.0388	54.0	6.40%	2138.6	4.48%
CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer	GHCACGTG	1e-2	-5.026e+00	0.0388	31.0	3.67%	1076.1	2.26%
Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer	CGGTCACSCCAC	1e-2	-5.010e+00	0.0388	10.0	1.18%	220.3	0.46%
TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer	GAGGTCAAAGGTCA	1e-2	-4.980e+00	0.0391	8.0	0.95%	154.1	0.32%
Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer	TGTCANYT	1e-2	-4.975e+00	0.0391	143.0	16.94%	6623.1	13.88%
PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer	ACCRTGACTAATTNN	1e-2	-4.941e+00	0.0394	12.0	1.42%	294.4	0.62%
Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	ATTGCATCAT	1e-2	-4.898e+00	0.0405	13.0	1.54%	333.3	0.70%
n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer	VRCCACGTGG	1e-2	-4.815e+00	0.0434	39.0	4.62%	1457.1	3.05%
SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer	ASWTCCTGBT	1e-2	-4.803e+00	0.0434	54.0	6.40%	2165.8	4.54%
c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	VVCCACGTGG	1e-2	-4.761e+00	0.0445	27.0	3.20%	920.4	1.93%
JunD(bZIP)/K562-JunD-ChIP-Seq/Homer	ATGACGTCATCN	1e-2	-4.730e+00	0.0453	8.0	0.95%	161.8	0.34%
Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer	NRRTGACGTCAT	1e-2	-4.724e+00	0.0453	18.0	2.13%	539.2	1.13%
CRE(bZIP)/Promoter/Homer	CSGTGACGTCAC	1e-2	-4.707e+00	0.0453	18.0	2.13%	540.4	1.13%
Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer	RCCACGTGGYYN	1e-2	-4.678e+00	0.0457	33.0	3.91%	1195.0	2.51%
Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	CTGGCAGSCTGCCA	1e-1	-4.565e+00	0.0505	22.0	2.61%	717.3	1.50%
Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer	SVYTTCCNGGAARB	1e-1	-4.426e+00	0.0573	38.0	4.50%	1449.1	3.04%
Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer	GGGGGGGG	1e-1	-4.286e+00	0.0651	108.0	12.80%	4945.7	10.37%
EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer	AVCAGGAAGT	1e-1	-4.247e+00	0.0668	69.0	8.18%	2973.1	6.23%
Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer	CAAAGGTCAG	1e-1	-3.996e+00	0.0847	95.0	11.26%	4331.5	9.08%
HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer	TTTTATKRGG	1e-1	-3.978e+00	0.0852	42.0	4.98%	1687.1	3.54%
NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer	ATTTTCCATT	1e-1	-3.823e+00	0.0982	44.0	5.21%	1802.5	3.78%
STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer	NYTTCCWGGAAR	1e-1	-3.775e+00	0.1019	47.0	5.57%	1954.7	4.10%
Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer	GTCACGTGGT	1e-1	-3.773e+00	0.1019	17.0	2.01%	556.5	1.17%
ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer	ATTTCCCAGVAKSCY	1e-1	-3.731e+00	0.1038	20.0	2.37%	690.1	1.45%
Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer	CCCCTCCCCCAC	1e-1	-3.730e+00	0.1038	16.0	1.90%	516.8	1.08%
E-box(bHLH)/Promoter/Homer	SSGGTCACGTGA	1e-1	-3.552e+00	0.1214	8.0	0.95%	201.1	0.42%
CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer	CCATATATGGNM	1e-1	-3.541e+00	0.1214	14.0	1.66%	443.3	0.93%
Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer	GCTATTTTTAGC	1e-1	-3.442e+00	0.1324	9.0	1.07%	244.0	0.51%
AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer	TGGCAGTTGG	1e-1	-3.436e+00	0.1324	67.0	7.94%	3002.4	6.29%
RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer	AGGTCAAGGTCA	1e-1	-3.290e+00	0.1506	3.0	0.36%	41.3	0.09%
BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer	GNCACGTG	1e-1	-3.178e+00	0.1666	73.0	8.65%	3355.4	7.03%
RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer	AAACCACARM	1e-1	-3.158e+00	0.1682	39.0	4.62%	1644.4	3.45%
NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer	CTGCGCATGCGC	1e-1	-3.080e+00	0.1799	20.0	2.37%	744.9	1.56%
c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	ATGACGTCATCY	1e-1	-3.050e+00	0.1834	13.0	1.54%	432.6	0.91%
Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer	GCCACRCCCACY	1e-1	-3.003e+00	0.1902	30.0	3.55%	1225.3	2.57%
Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer	MACAGGAAGT	1e-1	-2.937e+00	0.2011	14.0	1.66%	484.4	1.02%
HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer	NCYAATAAAA	1e-1	-2.903e+00	0.2060	40.0	4.74%	1729.4	3.63%
YY1(Zf)/Promoter/Homer	CAAGATGGCGGC	1e-1	-2.816e+00	0.2222	7.0	0.83%	195.0	0.41%
NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer	NVCACGTG	1e-1	-2.810e+00	0.2222	65.0	7.70%	3014.9	6.32%
EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer	DGTCCCYRGGGA	1e-1	-2.766e+00	0.2290	14.0	1.66%	497.6	1.04%
PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	AGAGGAAGTG	1e-1	-2.753e+00	0.2297	24.0	2.84%	965.9	2.02%
KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer	MKGGGYGTGGCC	1e-1	-2.740e+00	0.2304	75.0	8.89%	3547.3	7.44%
Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer	CYAAAAATAG	1e-1	-2.698e+00	0.2381	17.0	2.01%	640.6	1.34%
Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer	RTCACSCCAY	1e-1	-2.685e+00	0.2387	10.0	1.18%	326.5	0.68%
Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer	DCYAAAAATAGM	1e-1	-2.639e+00	0.2478	16.0	1.90%	599.9	1.26%
Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer	SSCMATWAAA	1e-1	-2.600e+00	0.2552	25.0	2.96%	1031.1	2.16%
PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer	TGACCTTTGCCCCA	1e-1	-2.558e+00	0.2635	39.0	4.62%	1731.5	3.63%
c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer	VCCACGTG	1e-1	-2.557e+00	0.2635	31.0	3.67%	1331.8	2.79%
ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer	ACVAGGAAGT	1e-1	-2.547e+00	0.2635	37.0	4.38%	1632.2	3.42%
PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer	VAGRACAKNCTGTBC	1e-1	-2.506e+00	0.2700	79.0	9.36%	3809.3	7.99%
MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer	TGCTGACTCA	1e-1	-2.505e+00	0.2700	32.0	3.79%	1388.2	2.91%
NFY(CCAAT)/Promoter/Homer	RGCCAATSRG	1e-1	-2.496e+00	0.2700	37.0	4.38%	1640.7	3.44%
E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer	GGCGGGAAAH	1e-1	-2.477e+00	0.2705	42.0	4.98%	1896.8	3.98%
LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer	RGGTTACTANAGGTCA	1e-1	-2.464e+00	0.2716	3.0	0.36%	58.2	0.12%
Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer	NNTGTGGATTSS	1e-1	-2.429e+00	0.2790	24.0	2.84%	1003.7	2.10%
NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer	ACCATCTGTT	1e-1	-2.383e+00	0.2894	64.0	7.58%	3050.1	6.39%
Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer	NAHCAGCTGD	1e-1	-2.337e+00	0.3005	60.0	7.11%	2851.1	5.98%
HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer	TACGTGCV	1e-1	-2.331e+00	0.3005	16.0	1.90%	628.4	1.32%
BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer	NHAACBGYYV	1e-1	-2.326e+00	0.3005	62.0	7.35%	2958.7	6.20%
ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer	SMCAGTCWGAKGGAGGAGGC	1e-1	-2.317e+00	0.3005	5.0	0.59%	137.2	0.29%
Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer	AAACMATTAN	1e0	-2.235e+00	0.3218	20.0	2.37%	831.8	1.74%
Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer	NAACAGCTGG	1e0	-2.209e+00	0.3276	49.0	5.81%	2305.2	4.83%
bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer	NAGTTTCABTHTGACTNW	1e0	-2.205e+00	0.3276	15.0	1.78%	593.7	1.24%
ZNF41(Zf)/HEK293-ZNF41.GFP-ChIP-Seq(GSE58341)/Homer	CCTCATGGTGYCYTWYTCCCTTGTG	1e0	-2.200e+00	0.3276	2.0	0.24%	32.4	0.07%
SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer	AVCAGCTG	1e0	-2.185e+00	0.3276	220.0	26.07%	11550.3	24.21%
PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GTCACGCTCSCTGM	1e0	-2.157e+00	0.3341	6.0	0.71%	186.1	0.39%
bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer	KCACGTGMCN	1e0	-2.072e+00	0.3608	16.0	1.90%	655.0	1.37%
NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer	GGGGGAATCCCC	1e0	-2.056e+00	0.3640	8.0	0.95%	280.0	0.59%
PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	MGGAAGTGAAAC	1e0	-1.977e+00	0.3909	59.0	6.99%	2880.2	6.04%
Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer	TAATCCCN	1e0	-1.971e+00	0.3909	174.0	20.62%	9106.3	19.09%
Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer	TGACCTTTNCNT	1e0	-1.955e+00	0.3933	7.0	0.83%	242.1	0.51%
KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer	GGGGGTGTGTCC	1e0	-1.910e+00	0.4082	28.0	3.32%	1277.3	2.68%
Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer	VCAGCTGYTG	1e0	-1.900e+00	0.4094	50.0	5.92%	2423.4	5.08%
NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer	GCCATCTGTT	1e0	-1.868e+00	0.4194	35.0	4.15%	1645.4	3.45%
Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer	GYMATAAAAH	1e0	-1.865e+00	0.4194	22.0	2.61%	979.5	2.05%
Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer	CTGTTTAC	1e0	-1.859e+00	0.4194	72.0	8.53%	3602.4	7.55%
Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer	YCATYAATCA	1e0	-1.849e+00	0.4194	33.0	3.91%	1545.2	3.24%
Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer	NGCGTGGGCGGR	1e0	-1.843e+00	0.4194	14.0	1.66%	583.0	1.22%
FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer	AGGTCANTGACCTB	1e0	-1.782e+00	0.4408	17.0	2.01%	739.9	1.55%
ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer	RGGGCACTAACY	1e0	-1.772e+00	0.4421	29.0	3.44%	1352.9	2.84%
Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer	MAATCACTGC	1e0	-1.771e+00	0.4421	22.0	2.61%	993.2	2.08%
CHR(?)/Hela-CellCycle-Expression/Homer	SRGTTTCAAA	1e0	-1.715e+00	0.4613	26.0	3.08%	1207.2	2.53%
AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer	ATGCCCTGAGGC	1e0	-1.614e+00	0.5069	53.0	6.28%	2652.3	5.56%
EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer	GTCCCCWGGGGA	1e0	-1.604e+00	0.5085	57.0	6.75%	2869.7	6.02%
E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer	BTKGGCGGGAAA	1e0	-1.601e+00	0.5085	50.0	5.92%	2495.9	5.23%
THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer	TRAGGTCA	1e0	-1.601e+00	0.5085	161.0	19.08%	8547.3	17.92%
p73(p53)/Trachea-p73-ChIP-Seq(PRJNA310161)/Homer	NRRRCAWGTCCDGRCATGYY	1e0	-1.597e+00	0.5085	2.0	0.24%	47.6	0.10%
Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer	AGGTGHCAGACA	1e0	-1.594e+00	0.5085	7.0	0.83%	269.3	0.56%
NRF(NRF)/Promoter/Homer	STGCGCATGCGC	1e0	-1.584e+00	0.5085	17.0	2.01%	766.0	1.61%
ZNF16(Zf)/HEK293-ZNF16.GFP-ChIP-Seq(GSE58341)/Homer	MACCTTCYATGGCTCCCTAKTGCCY	1e0	-1.582e+00	0.5085	1.0	0.12%	13.6	0.03%
CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer	NGYCATAAAWCH	1e0	-1.575e+00	0.5085	27.0	3.20%	1284.1	2.69%
HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer	RTACGTGC	1e0	-1.567e+00	0.5085	54.0	6.40%	2718.2	5.70%
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer	CTGTCTGG	1e0	-1.563e+00	0.5085	65.0	7.70%	3311.6	6.94%
ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer	ANCAGGAAGT	1e0	-1.558e+00	0.5085	31.0	3.67%	1497.9	3.14%
Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer	GCTATTTTTGGM	1e0	-1.548e+00	0.5085	27.0	3.20%	1289.6	2.70%
GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NNNNNBAGATAWYATCTVHN	1e0	-1.545e+00	0.5085	5.0	0.59%	179.6	0.38%
Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer	SCTGTCAMTCAN	1e0	-1.545e+00	0.5085	9.0	1.07%	370.0	0.78%
PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer	ADGGYAGYAGCATCT	1e0	-1.538e+00	0.5085	18.0	2.13%	824.2	1.73%
Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer	YTGWCADY	1e0	-1.528e+00	0.5085	113.0	13.39%	5937.5	12.45%
RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer	TAGGGCAAAGGTCA	1e0	-1.520e+00	0.5085	44.0	5.21%	2195.4	4.60%
AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer	SCCTSAGGSCAW	1e0	-1.515e+00	0.5085	69.0	8.18%	3542.5	7.43%
ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer	TGGGGAAGGGCM	1e0	-1.514e+00	0.5085	47.0	5.57%	2357.6	4.94%
EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer	ATTTCCTGTN	1e0	-1.477e+00	0.5101	30.0	3.55%	1461.3	3.06%
RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer	AGGTCAAGGTCA	1e0	-1.474e+00	0.5101	5.0	0.59%	184.5	0.39%
Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	CACAGCAGGGGG	1e0	-1.460e+00	0.5124	25.0	2.96%	1201.2	2.52%
Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer	ATATGCAAAT	1e0	-1.420e+00	0.5298	10.0	1.18%	433.1	0.91%
Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer	SCTGTCAVTCAV	1e0	-1.402e+00	0.5365	9.0	1.07%	385.4	0.81%
NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer	SARTGGAAAAWRTGAGTCAB	1e0	-1.401e+00	0.5365	7.0	0.83%	286.6	0.60%
FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer	SCHTGTTTACAT	1e0	-1.396e+00	0.5365	21.0	2.49%	1003.2	2.10%
Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer	KTGACCTTGA	1e0	-1.374e+00	0.5418	21.0	2.49%	1007.1	2.11%
RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer	GCTGTGGTTW	1e0	-1.351e+00	0.5515	22.0	2.61%	1064.7	2.23%
Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer	GGCCATAAATCA	1e0	-1.349e+00	0.5515	17.0	2.01%	802.2	1.68%
Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer	ATGCATAATTCA	1e0	-1.343e+00	0.5515	11.0	1.30%	493.9	1.04%
Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer	TGCGTGGGYG	1e0	-1.323e+00	0.5573	41.0	4.86%	2085.8	4.37%
IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer	ACTGAAACCA	1e0	-1.318e+00	0.5573	16.0	1.90%	755.3	1.58%
GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer	CRGCTGBNGNSNNSAGATAA	1e0	-1.317e+00	0.5573	4.0	0.47%	148.4	0.31%
Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer	ACTYKNATTCGTGNTACTTC	1e0	-1.307e+00	0.5573	3.0	0.36%	102.1	0.21%
Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer	HNRAATCAAT	1e0	-1.285e+00	0.5655	15.0	1.78%	708.5	1.49%
HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer	NTATYGATCH	1e0	-1.276e+00	0.5679	18.0	2.13%	867.8	1.82%
MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer	RTCATGTGAC	1e0	-1.269e+00	0.5687	30.0	3.55%	1507.8	3.16%
ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer	RCAGGATGTGGT	1e0	-1.267e+00	0.5687	5.0	0.59%	200.5	0.42%
RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer	SAAACCACAG	1e0	-1.258e+00	0.5687	22.0	2.61%	1082.7	2.27%
CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	NTNATGCAAYMNNHTGMAAY	1e0	-1.255e+00	0.5687	5.0	0.59%	201.6	0.42%
FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer	NYYTGTTTACHN	1e0	-1.245e+00	0.5698	13.0	1.54%	610.1	1.28%
ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer	GAGSCCGAGC	1e0	-1.243e+00	0.5698	17.0	2.01%	820.4	1.72%
AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer	CCAGGAACAG	1e0	-1.236e+00	0.5698	153.0	18.13%	8280.2	17.36%
Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer	YTAATTRAWWCCAGATGT	1e0	-1.198e+00	0.5877	6.0	0.71%	256.9	0.54%
OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer	ATGCATWATGCATRW	1e0	-1.180e+00	0.5948	22.0	2.61%	1098.3	2.30%
ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer	ARGAGGMCAAAATGW	1e0	-1.178e+00	0.5948	6.0	0.71%	258.6	0.54%
p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer	NNDRCATGYCYNRRCATGYH	1e0	-1.166e+00	0.5968	10.0	1.18%	465.1	0.97%
COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer	AGRGGTCA	1e0	-1.150e+00	0.6036	61.0	7.23%	3229.3	6.77%
NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WNTGTTTRYTTTGGCA	1e0	-1.142e+00	0.6053	2.0	0.24%	65.5	0.14%
Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer	BTCAAGGTCA	1e0	-1.133e+00	0.6075	23.0	2.73%	1162.3	2.44%
IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer	CTTTCANTATGACTV	1e0	-1.131e+00	0.6075	4.0	0.47%	162.8	0.34%
GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer	VAGRACAKWCTGTYC	1e0	-1.123e+00	0.6075	7.0	0.83%	315.8	0.66%
Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer	AGGVNCCTTTGT	1e0	-1.107e+00	0.6138	26.0	3.08%	1330.4	2.79%
Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer	WATGCAAATGAG	1e0	-1.107e+00	0.6138	14.0	1.66%	685.9	1.44%
Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer	CTAATKGV	1e0	-1.079e+00	0.6250	69.0	8.18%	3697.1	7.75%
Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer	VNRVCAGCTGGY	1e0	-1.042e+00	0.6450	44.0	5.21%	2332.4	4.89%
Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	HTTTCCCASG	1e0	-1.038e+00	0.6450	61.0	7.23%	3271.3	6.86%
GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer	RGGATTAR	1e0	-1.035e+00	0.6450	36.0	4.27%	1895.3	3.97%
ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer	GTCWGCTGTYYCTCT	1e0	-1.018e+00	0.6513	3.0	0.36%	121.4	0.25%
STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer	RTTTCTNAGAAA	1e0	-1.002e+00	0.6580	14.0	1.66%	704.4	1.48%
Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer	GWAAYHTGAKMC	1e0	-9.860e-01	0.6657	32.0	3.79%	1690.1	3.54%
Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer	GGCCYCCTGCTGDGH	1e0	-9.826e-01	0.6657	32.0	3.79%	1691.2	3.55%
Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer	TATGCWAATBAV	1e0	-9.783e-01	0.6657	10.0	1.18%	493.9	1.04%
NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer	KCCACGTGAC	1e0	-9.499e-01	0.6801	38.0	4.50%	2032.3	4.26%
REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer	GGMGCTGTCCATGGTGCTGA	1e0	-9.396e-01	0.6839	1.0	0.12%	28.0	0.06%
Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer	ATTAACACCT	1e0	-9.292e-01	0.6877	72.0	8.53%	3928.6	8.24%
RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer	NWAACCACADNN	1e0	-9.108e-01	0.6971	22.0	2.61%	1161.4	2.43%
Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer	ATGAATATTC	1e0	-9.061e-01	0.6971	3.0	0.36%	130.8	0.27%
Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAW	1e0	-9.032e-01	0.6971	13.0	1.54%	669.0	1.40%
ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer	GNCTGTASTRNTGBCTCHTT	1e0	-8.868e-01	0.7040	1.0	0.12%	30.3	0.06%
PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer	AAGAACATWHTGTTC	1e0	-8.760e-01	0.7083	6.0	0.71%	293.6	0.62%
Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer	DGTAAACA	1e0	-8.759e-01	0.7083	21.0	2.49%	1115.5	2.34%
Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer	VBSYGTCTGG	1e0	-8.709e-01	0.7083	61.0	7.23%	3341.9	7.01%
Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer	VGCTGWCAVB	1e0	-8.642e-01	0.7083	55.0	6.52%	3009.6	6.31%
THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer	GGTCANYTGAGGWCA	1e0	-8.544e-01	0.7105	14.0	1.66%	734.6	1.54%
PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer	NGTGTTCAVTSAAGCGKAAA	1e0	-8.391e-01	0.7182	3.0	0.36%	136.1	0.29%
HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer	GGCCATAAATCA	1e0	-8.389e-01	0.7182	19.0	2.25%	1014.5	2.13%
Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer	CCTGCTGAGH	1e0	-8.238e-01	0.7227	34.0	4.03%	1853.0	3.88%
E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer	GGCGGGAARN	1e0	-8.105e-01	0.7290	40.0	4.74%	2193.1	4.60%
STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer	NATTTCCNGGAAAT	1e0	-8.086e-01	0.7290	11.0	1.30%	578.5	1.21%
Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer	BTCAAGGTCA	1e0	-8.012e-01	0.7293	16.0	1.90%	857.3	1.80%
Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer	TGTTKCCTAGCAACM	1e0	-7.951e-01	0.7305	42.0	4.98%	2311.1	4.84%
ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer	TGGAACAGMA	1e0	-7.820e-01	0.7369	32.0	3.79%	1756.7	3.68%
Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer	GKVTCADRTTWC	1e0	-7.732e-01	0.7401	7.0	0.83%	363.5	0.76%
TATA-Box(TBP)/Promoter/Homer	CCTTTTAWAGSC	1e0	-7.696e-01	0.7401	39.0	4.62%	2154.0	4.52%
Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer	VCAKCTGGNNNCCAGMTGBN	1e0	-7.509e-01	0.7502	4.0	0.47%	200.8	0.42%
Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer	TGATTRATGGCY	1e0	-7.470e-01	0.7502	5.0	0.59%	257.0	0.54%
FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer	WAAGTAAACA	1e0	-7.340e-01	0.7563	26.0	3.08%	1436.6	3.01%
Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer	TTRAGTGSYK	1e0	-7.241e-01	0.7605	71.0	8.41%	3975.4	8.33%
MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer	HWWGTCAGCAWWTTT	1e0	-7.208e-01	0.7605	8.0	0.95%	428.9	0.90%
FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer	TRTTTACTTW	1e0	-7.202e-01	0.7605	27.0	3.20%	1497.8	3.14%
ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer	WDNCTGGGCA	1e0	-7.091e-01	0.7622	54.0	6.40%	3024.1	6.34%
Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer	CYTGTTTACWYW	1e0	-7.078e-01	0.7622	21.0	2.49%	1163.9	2.44%
HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer	CARRGKBCAAAGTYCA	1e0	-7.024e-01	0.7622	12.0	1.42%	658.0	1.38%
Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer	ACAGCTGTTN	1e0	-7.004e-01	0.7622	117.0	13.86%	6586.1	13.81%
Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer	BCCATTGTTC	1e0	-7.004e-01	0.7622	27.0	3.20%	1504.8	3.15%
Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer	GKTAATGR	1e0	-6.998e-01	0.7622	93.0	11.02%	5231.4	10.97%
FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer	NVWTGTTTAC	1e0	-6.986e-01	0.7622	30.0	3.55%	1674.5	3.51%
SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer	CAAGGHCANV	1e0	-6.940e-01	0.7622	12.0	1.42%	659.5	1.38%
TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer	GTCACGTGACYV	1e0	-6.938e-01	0.7622	3.0	0.36%	151.7	0.32%
MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer	RRCAGCTGYTSY	1e0	-6.775e-01	0.7622	35.0	4.15%	1965.2	4.12%
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer	TWGTCTGV	1e0	-6.730e-01	0.7622	105.0	12.44%	5927.1	12.43%
EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer	NWGGGTGTGGCY	1e0	-6.431e-01	0.7778	6.0	0.71%	329.5	0.69%
Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer	ATGMATATDC	1e0	-6.408e-01	0.7778	27.0	3.20%	1526.5	3.20%
Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer	RCCATMTGTT	1e0	-6.350e-01	0.7778	66.0	7.82%	3743.9	7.85%
GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATGKDGAGATAAG	1e0	-6.282e-01	0.7800	2.0	0.24%	101.4	0.21%
STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer	ABTTCYYRRGAA	1e0	-6.193e-01	0.7838	19.0	2.25%	1078.2	2.26%
ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer	AGGAARCAGCTG	1e0	-6.117e-01	0.7866	3.0	0.36%	161.6	0.34%
Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer	YCTTTGTTCC	1e0	-6.097e-01	0.7866	25.0	2.96%	1424.9	2.99%
Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer	BAACAGCTGT	1e0	-5.972e-01	0.7918	26.0	3.08%	1486.7	3.12%
Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer	GGGGCTYGKCTGGGA	1e0	-5.864e-01	0.7973	11.0	1.30%	629.9	1.32%
FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WAAGTAAACA	1e0	-5.827e-01	0.7973	31.0	3.67%	1778.1	3.73%
Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer	GTTGCCATGGCAACM	1e0	-5.802e-01	0.7973	4.0	0.47%	224.5	0.47%
Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer	NNVVCAGCTGBN	1e0	-5.697e-01	0.8012	67.0	7.94%	3840.6	8.05%
STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer	TTCCKNAGAA	1e0	-5.641e-01	0.8026	19.0	2.25%	1097.1	2.30%
HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer	VCAGCTGBNN	1e0	-5.507e-01	0.8103	85.0	10.07%	4879.9	10.23%
Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer	TAATTAGN	1e0	-5.276e-01	0.8260	34.0	4.03%	1976.8	4.14%
Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer	ANTTMRCASBNNNGTGYKAAN	1e0	-5.261e-01	0.8260	6.0	0.71%	352.7	0.74%
Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer	CCWTTGTYYB	1e0	-5.204e-01	0.8260	50.0	5.92%	2899.7	6.08%
ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer	AACATCTGGA	1e0	-5.063e-01	0.8342	16.0	1.90%	944.8	1.98%
Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer	BSNTGTTTACWYWGN	1e0	-5.011e-01	0.8353	7.0	0.83%	417.1	0.87%
IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer	GAAASYGAAASY	1e0	-4.945e-01	0.8378	3.0	0.36%	178.4	0.37%
FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer	WWTRTAAACAVG	1e0	-4.885e-01	0.8396	20.0	2.37%	1184.1	2.48%
SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer	AAAGRGGAAGTG	1e0	-4.833e-01	0.8408	8.0	0.95%	482.0	1.01%
Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer	AGGTGTGAAM	1e0	-4.819e-01	0.8408	29.0	3.44%	1710.6	3.59%
PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer	GSCTGTCACTCA	1e0	-4.819e-01	0.8408	2.0	0.24%	118.2	0.25%
Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer	TBGCACGCAA	1e0	-4.687e-01	0.8437	25.0	2.96%	1484.7	3.11%
IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer	GRAASTGAAAST	1e0	-4.452e-01	0.8605	11.0	1.30%	671.6	1.41%
ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer	VAGGTCACNSTGACC	1e0	-4.213e-01	0.8781	6.0	0.71%	377.6	0.79%
Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer	NNNVCTGWGYAAACASN	1e0	-4.095e-01	0.8853	23.0	2.73%	1396.1	2.93%
Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer	RAACAATGGN	1e0	-4.027e-01	0.8881	30.0	3.55%	1811.4	3.80%
GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer	AAACYKGTTWDACMRGTTTB	1e0	-4.009e-01	0.8881	8.0	0.95%	505.4	1.06%
HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer	GYCATCMATCAT	1e0	-3.950e-01	0.8884	2.0	0.24%	131.3	0.28%
ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer	GAGCCTGGTACTGWGCCTGR	1e0	-3.532e-01	0.9230	8.0	0.95%	521.7	1.09%
Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer	NYTAATCCYB	1e0	-3.507e-01	0.9230	20.0	2.37%	1249.9	2.62%
OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAACAATG	1e0	-3.447e-01	0.9243	4.0	0.47%	272.7	0.57%
Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer	CCATTGTTYB	1e0	-3.417e-01	0.9243	19.0	2.25%	1194.0	2.50%
Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer	GTRGGTCASTGGGTCA	1e0	-3.399e-01	0.9243	3.0	0.36%	208.4	0.44%
Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer	SCCTAGCAACAG	1e0	-3.367e-01	0.9243	9.0	1.07%	589.3	1.24%
CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer	GCTAATCC	1e0	-3.085e-01	0.9448	70.0	8.29%	4225.7	8.86%
ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer	GRTGMTRGAGCC	1e0	-3.044e-01	0.9453	21.0	2.49%	1336.4	2.80%
Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer	BTBRAGTGSN	1e0	-3.014e-01	0.9453	64.0	7.58%	3882.7	8.14%
Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer	CCWTTGTY	1e0	-2.988e-01	0.9453	52.0	6.16%	3181.1	6.67%
Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer	GGTGYTGACAGS	1e0	-2.969e-01	0.9453	5.0	0.59%	351.3	0.74%
PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer	RGGTCTCTAACY	1e0	-2.851e-01	0.9503	7.0	0.83%	484.5	1.02%
ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer	GTGGGCCCCA	1e0	-2.744e-01	0.9572	6.0	0.71%	424.0	0.89%
GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NAGATWNBNATCTNN	1e0	-2.721e-01	0.9572	1.0	0.12%	81.1	0.17%
Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer	CCATTGTTNY	1e0	-2.667e-01	0.9580	46.0	5.45%	2858.8	5.99%
ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer	AGGCCTAG	1e0	-2.609e-01	0.9603	104.0	12.32%	6263.6	13.13%
Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer	CVGTSCTCCC	1e0	-2.556e-01	0.9621	82.0	9.72%	4988.3	10.46%
Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer	RRSCACTYAA	1e0	-2.550e-01	0.9621	69.0	8.18%	4228.0	8.86%
RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	GGGRAARRGRMCAGMTG	1e0	-2.533e-01	0.9621	8.0	0.95%	562.6	1.18%
PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer	ACTTTCACTTTC	1e0	-2.515e-01	0.9621	15.0	1.78%	1003.4	2.10%
LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer	AAGACCCYYN	1e0	-2.427e-01	0.9621	80.0	9.48%	4888.1	10.25%
Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer	AAGGTGTKAA	1e0	-2.291e-01	0.9713	39.0	4.62%	2479.8	5.20%
GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATAASR	1e0	-2.222e-01	0.9749	36.0	4.27%	2307.0	4.84%
HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer	GCACGTACCC	1e0	-2.189e-01	0.9749	12.0	1.42%	836.6	1.75%
Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer	NRAACCRGTTYRAACCRGYT	1e0	-2.109e-01	0.9794	3.0	0.36%	246.1	0.52%
Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer	YCTTATCTBN	1e0	-2.086e-01	0.9794	19.0	2.25%	1282.4	2.69%
PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer	GGAAGTGAAAST	1e0	-2.082e-01	0.9794	5.0	0.59%	386.9	0.81%
E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer	DNRCAGCTGY	1e0	-1.934e-01	0.9868	59.0	6.99%	3717.0	7.79%
Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer	CCATTGTATGCAAAT	1e0	-1.895e-01	0.9874	2.0	0.24%	180.2	0.38%
Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer	YTAATYNRATTA	1e0	-1.888e-01	0.9874	8.0	0.95%	597.1	1.25%
IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer	GAAAGTGAAAGT	1e0	-1.811e-01	0.9893	3.0	0.36%	258.3	0.54%
Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer	WWATRTAAACAN	1e0	-1.789e-01	0.9893	19.0	2.25%	1308.3	2.74%
MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer	AACAGCTG	1e0	-1.763e-01	0.9893	39.0	4.62%	2540.7	5.33%
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer	AAYTAGGTCA	1e0	-1.759e-01	0.9893	2.0	0.24%	185.1	0.39%
Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer	RSCACTYRAG	1e0	-1.717e-01	0.9893	92.0	10.90%	5706.1	11.96%
Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer	GGTTAAWCATTAA	1e0	-1.708e-01	0.9893	2.0	0.24%	187.1	0.39%
ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer	GARTGGTCATCGCCC	1e0	-1.708e-01	0.9893	2.0	0.24%	187.4	0.39%
Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer	BBCTTATCTS	1e0	-1.678e-01	0.9893	12.0	1.42%	873.5	1.83%
DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer	TWGHWACAWTGTWDC	1e0	-1.496e-01	0.9950	3.0	0.36%	273.3	0.57%
TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer	ACWTCAAAGG	1e0	-1.424e-01	0.9990	1.0	0.12%	114.6	0.24%
E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer	VDTTTCCCGCCA	1e0	-1.419e-01	0.9990	6.0	0.71%	493.8	1.04%
IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer	AGTTTCAKTTTC	1e0	-1.406e-01	0.9990	8.0	0.95%	631.7	1.32%
p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer	RRCATGYCYRGRCATGYYYN	1e0	-1.397e-01	0.9990	1.0	0.12%	115.7	0.24%
p53(p53)/Saos-p53-ChIP-Seq/Homer	RRCATGYCYRGRCATGYYYN	1e0	-1.397e-01	0.9990	1.0	0.12%	115.7	0.24%
Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer	SAGATAAGRV	1e0	-1.236e-01	1.0000	10.0	1.18%	781.1	1.64%
Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer	TGACANARRCCAGRC	1e0	-1.234e-01	1.0000	11.0	1.30%	848.3	1.78%
RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer	CGGTTGCCATGGCAAC	1e0	-1.160e-01	1.0000	2.0	0.24%	213.3	0.45%
VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer	ARAGGTCANWGAGTTCANNN	1e0	-1.043e-01	1.0000	3.0	0.36%	301.8	0.63%
Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer	AAGCACTTAA	1e0	-9.381e-02	1.0000	68.0	8.06%	4450.7	9.33%
GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer	CGTGGGTGGTCC	1e0	-9.004e-02	1.0000	2.0	0.24%	230.8	0.48%
DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer	YDGHTACAWTGTADC	1e0	-8.870e-02	1.0000	2.0	0.24%	231.3	0.48%
ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	RGRACASNSTGTYCYB	1e0	-8.248e-02	1.0000	3.0	0.36%	319.4	0.67%
Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer	NBWGATAAGR	1e0	-7.368e-02	1.0000	19.0	2.25%	1449.0	3.04%
Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCAATTA	1e0	-6.750e-02	1.0000	1.0	0.12%	154.3	0.32%
Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer	GTCATGCHTGRCTGS	1e0	-6.522e-02	1.0000	7.0	0.83%	643.7	1.35%
Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer	ADBTAATTAR	1e0	-6.241e-02	1.0000	46.0	5.45%	3196.8	6.70%
PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GCAGCCAAGCRTGACH	1e0	-5.002e-02	1.0000	8.0	0.95%	744.0	1.56%
GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer	NRGVACABNVTGTYCY	1e0	-4.947e-02	1.0000	1.0	0.12%	171.4	0.36%
Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer	NTAATBNAATTA	1e0	-4.947e-02	1.0000	12.0	1.42%	1029.0	2.16%
Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer	NNYTAATTAR	1e0	-4.905e-02	1.0000	28.0	3.32%	2099.9	4.40%
Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	RGCCATTAAC	1e0	-4.544e-02	1.0000	143.0	16.94%	9142.4	19.17%
ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer	AGGCCTRG	1e0	-4.321e-02	1.0000	53.0	6.28%	3709.8	7.78%
E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer	CWGGCGGGAA	1e0	-3.064e-02	1.0000	12.0	1.42%	1085.8	2.28%
Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer	SNGCACCTGCHS	1e0	-2.812e-02	1.0000	14.0	1.66%	1237.9	2.60%
HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer	GTTAATNATTAA	1e0	-2.674e-02	1.0000	1.0	0.12%	205.1	0.43%
Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	KGTTGCCATGGCAA	1e0	-2.239e-02	1.0000	3.0	0.36%	416.8	0.87%
E2F(E2F)/Hela-CellCycle-Expression/Homer	TTSGCGCGAAAA	1e0	-2.005e-02	1.0000	1.0	0.12%	221.3	0.46%
X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	GGTTGCCATGGCAA	1e0	-1.833e-02	1.0000	1.0	0.12%	226.6	0.47%
E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	NVCACCTGBN	1e0	-1.777e-02	1.0000	45.0	5.33%	3372.4	7.07%
ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer	AAGGKGRCGCAGGCA	1e0	-1.745e-02	1.0000	3.0	0.36%	434.9	0.91%
Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer	ASWTCAAAGG	1e0	-6.688e-03	1.0000	2.0	0.24%	400.6	0.84%
Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer	ASATCAAAGGVA	1e0	-5.024e-03	1.0000	5.0	0.59%	708.0	1.48%
ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer	VCAGGTRDRY	1e0	-4.290e-04	1.0000	47.0	5.57%	4074.0	8.54%
FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	AGTAAACAAAAAAGAACAND	1e0	0.000e+00	1.0000	0.0	0.00%	75.8	0.16%
RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer	RGGTCADNNAGAGGTCAV	1e0	0.000e+00	1.0000	0.0	0.00%	41.6	0.09%
DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer	NWTAAYCYAATCAWN	1e0	0.000e+00	1.0000	0.0	0.00%	64.1	0.13%
EBNA1(EBV-virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer	GGYAGCAYDTGCTDCCCNNN	1e0	0.000e+00	1.0000	0.0	0.00%	22.7	0.05%
GATA3(Zf),DR8/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATSTNDNNDSAGATAASN	1e0	0.000e+00	1.0000	0.0	0.00%	72.8	0.15%
ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer	AGTTTCASTTTC	1e0	0.000e+00	1.0000	0.0	0.00%	102.9	0.22%
OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer	ATGAATWATTCATGA	1e0	0.000e+00	1.0000	0.0	0.00%	21.2	0.04%
OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer	ATGAATATTCATGAG	1e0	0.000e+00	1.0000	0.0	0.00%	8.5	0.02%
OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer	YATGCATATRCATRT	1e0	0.000e+00	1.0000	0.0	0.00%	82.0	0.17%
p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	ACATGCCCGGGCAT	1e0	0.000e+00	1.0000	0.0	0.00%	30.6	0.06%
Pax7(Paired,Homeobox),longest/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	NTAATTDGCYAATTANNWWD	1e0	0.000e+00	1.0000	0.0	0.00%	42.2	0.09%
Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCHGATTAC	1e0	0.000e+00	1.0000	0.0	0.00%	23.7	0.05%
T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer	ACTTTCGTTTCT	1e0	0.000e+00	1.0000	0.0	0.00%	24.9	0.05%
ZFP3(Zf)/HEK293-ZFP3.GFP-ChIP-Seq(GSE58341)/Homer	GGGTTTTGAAGGATGARTAGGAGTT	1e0	0.000e+00	1.0000	0.0	0.00%	2.3	0.00%
ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer	AGAAATGACTTCCCT	1e0	0.000e+00	1.0000	0.0	0.00%	10.1	0.02%