Information for 2-TGCCACCTASTGGTAA (Motif 2)

G A C T A T C G A G T C A G T C G C T A A G T C G T A C A G C T C T G A A T C G C A G T C T A G T A C G G A C T T C G A T C G A
Reverse Opposite:
A G C T A G C T C T G A A T G C G A T C G T C A A T G C G A C T C T G A C A T G T C A G C G A T A C T G A C T G A T G C C G T A
p-value:1e-22
log p-value:-5.146e+01
Information Content per bp:1.706
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.78%
Number of Background Sequences with motif12.8
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets54.4 +/- 25.1bp
Average Position of motif in Background34.4 +/- 19.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.84
Offset:-4
Orientation:forward strand
Alignment:----TGCCACCTASTGGTAA
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C G T G A C T A T C G A G T C A G T C G C T A A G T C G T A C A G C T C T G A A T C G C A G T C T A G T A C G G A C T T C G A T C G A
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.81
Offset:-3
Orientation:reverse strand
Alignment:---TGCCACCTASTGGTAA
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T G A C T A T C G A G T C A G T C G C T A A G T C G T A C A G C T C T G A A T C G C A G T C T A G T A C G G A C T T C G A T C G A
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.75
Offset:-6
Orientation:forward strand
Alignment:------TGCCACCTASTGGTAA
CNNBRGCGCCCCCTGSTGGC--
 A C G T A C G T A C G T A C G T A C G T A C G T G A C T A T C G A G T C A G T C G C T A A G T C G T A C A G C T C T G A A T C G C A G T C T A G T A C G G A C T T C G A T C G A
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TGCCACCTASTGGTAA
-GCCATCTGTT-----
 G A C T A T C G A G T C A G T C G C T A A G T C G T A C A G C T C T G A A T C G C A G T C T A G T A C G G A C T T C G A T C G A
A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T A C G T A C G T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TGCCACCTASTGGTAA
ATGCCAACC--------
 A C G T G A C T A T C G A G T C A G T C G C T A A G T C G T A C A G C T C T G A A T C G C A G T C T A G T A C G G A C T T C G A T C G A
T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TGCCACCTASTGGTAA
TGACACCT--------
 G A C T A T C G A G T C A G T C G C T A A G T C G T A C A G C T C T G A A T C G C A G T C T A G T A C G G A C T T C G A T C G A
G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:7
Score:0.54
Offset:1
Orientation:forward strand
Alignment:TGCCACCTASTGGTAA
-ACCATCTGTT-----
 G A C T A T C G A G T C A G T C G C T A A G T C G T A C A G C T C T G A A T C G C A G T C T A G T A C G G A C T T C G A T C G A
A C G T T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T A C G T A C G T A C G T A C G T A C G T

SCRT1/MA0743.1/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TGCCACCTASTGGTAA
ANCCACCTGTTGCNC-
 G A C T A T C G A G T C A G T C G C T A A G T C G T A C A G C T C T G A A T C G C A G T C T A G T A C G G A C T T C G A T C G A
C T G A T C G A T G A C G T A C T C G A G T A C G A T C A C G T A C T G A C G T C A G T C T A G T G A C C G A T A G T C A C G T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:9
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:TGCCACCTASTGGTAA
-GCCAGCTGBTNB---
 G A C T A T C G A G T C A G T C G C T A A G T C G T A C A G C T C T G A A T C G C A G T C T A G T A C G G A C T T C G A T C G A
A C G T T C A G T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G C T T G C A A G T C A C G T A C G T A C G T

SCRT2/MA0744.1/Jaspar

Match Rank:10
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:TGCCACCTASTGGTAA
--CCACCTGTTGCAT-
 G A C T A T C G A G T C A G T C G C T A A G T C G T A C A G C T C T G A A T C G C A G T C T A G T A C G G A C T T C G A T C G A
A C G T A C G T T A G C G T A C C G T A A T G C A G T C A C G T C A T G A C G T A C G T A C T G T G A C C G T A A G C T A C G T