Information for 4-CGCGAAGGTTCTG (Motif 3)

A T G C A C T G A T G C C T A G T C G A G T C A C T A G A C T G G A C T C A G T A T G C C G A T C T A G
Reverse Opposite:
A G T C C G T A A T C G G T C A C T G A G T A C G A T C A C G T A C G T A G T C T A C G T G A C A T C G
p-value:1e-36
log p-value:-8.421e+01
Information Content per bp:1.693
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif4.58%
Number of Background Sequences with motif50.5
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets43.3 +/- 28.2bp
Average Position of motif in Background51.8 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HSF4/MA0771.1/Jaspar

Match Rank:1
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CGCGAAGGTTCTG
TTCTAGAACGTTC--
 A C G T A C G T A T G C A C T G A T G C C T A G T C G A G T C A C T A G A C T G G A C T C A G T A T G C C G A T C T A G
C G A T C A G T T A G C A G C T T C G A A T C G G C T A G C T A A G T C T C A G C G A T C G A T A G T C A C G T A C G T

HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----CGCGAAGGTTCTG---
NNTTCTGGAANNTTCTAGAA
 A C G T A C G T A C G T A C G T A T G C A C T G A T G C C T A G T C G A G T C A C T A G A C T G G A C T C A G T A T G C C G A T C T A G A C G T A C G T A C G T
A T G C T A G C A G C T A G C T T G A C G A C T T C A G T A C G G T C A C T G A A T C G T A G C G A C T C A G T A G T C A G C T T C G A A T C G T G C A T G C A

PB0161.1_Rxra_2/Jaspar

Match Rank:3
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CGCGAAGGTTCTG--
TCGCGAAGGTTGTACT
 A C G T A T G C A C T G A T G C C T A G T C G A G T C A C T A G A C T G G A C T C A G T A T G C C G A T C T A G A C G T A C G T
C A G T T G A C T C A G G T A C T C A G G C T A G C T A C T A G A C T G A C G T A G C T T C A G A G C T C G T A G T A C C A G T

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:4
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CGCGAAGGTTCTG
TTCTAGAABNTTCTA
 A C G T A C G T A T G C A C T G A T G C C T A G T C G A G T C A C T A G A C T G G A C T C A G T A T G C C G A T C T A G
G A C T A G C T G T A C G A C T C T G A A C T G G T C A C T G A A T G C T A C G G A C T A C G T A G T C G A C T C T G A

HSF1/MA0486.2/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CGCGAAGGTTCTG
TTCTAGAACGTTC--
 A C G T A C G T A T G C A C T G A T G C C T A G T C G A G T C A C T A G A C T G G A C T C A G T A T G C C G A T C T A G
C G A T C A G T T A G C A G C T T G C A A C T G G T C A C G T A A G T C T C A G G C A T C G A T A G T C A C G T A C G T

HSF2/MA0770.1/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CGCGAAGGTTCTG
TTCTAGAACGTTC--
 A C G T A C G T A T G C A C T G A T G C C T A G T C G A G T C A C T A G A C T G G A C T C A G T A T G C C G A T C T A G
C G A T C A G T T G A C A G C T T C G A C T A G G T C A C G T A A G T C C T A G C G A T G A C T A G T C A C G T A C G T

E2F4/MA0470.1/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CGCGAAGGTTCTG
GGGCGGGAAGG-----
 A C G T A C G T A C G T A T G C A C T G A T G C C T A G T C G A G T C A C T A G A C T G G A C T C A G T A T G C C G A T C T A G
A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G A C G T A C G T A C G T A C G T A C G T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:8
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CGCGAAGGTTCTG
CWGGCGGGAA-------
 A C G T A C G T A C G T A C G T A T G C A C T G A T G C C T A G T C G A G T C A C T A G A C T G G A C T C A G T A T G C C G A T C T A G
T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

E2F(E2F)/Hela-CellCycle-Expression/Homer

Match Rank:9
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CGCGAAGGTTCTG
TTCGCGCGAAAA-----
 A C G T A C G T A C G T A C G T A T G C A C T G A T G C C T A G T C G A G T C A C T A G A C T G G A C T C A G T A T G C C G A T C T A G
A G C T A G C T T A G C A T C G A G T C A C T G A T G C A T C G T C G A C T G A T C G A C T G A A C G T A C G T A C G T A C G T A C G T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CGCGAAGGTTCTG
GGCGGGAARN-----
 A C G T A C G T A T G C A C T G A T G C C T A G T C G A G T C A C T A G A C T G G A C T C A G T A T G C C G A T C T A G
T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G A C G T A C G T A C G T A C G T A C G T