Information for 10-AGGARKATTCAGGTAW (Motif 14)

G T C A A C T G C T A G C G T A C T A G C A T G C T G A A C G T A C G T T G A C C G T A C T A G C T A G G C A T G T C A C G A T
Reverse Opposite:
G C A T A C G T C G T A A G T C A G T C A C G T A C T G G T C A G T C A A G C T G T A C A G T C C G A T G A T C G T A C A C G T
p-value:1e-9
log p-value:-2.181e+01
Information Content per bp:1.750
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.95%
Number of Background Sequences with motif6.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.5 +/- 21.4bp
Average Position of motif in Background34.1 +/- 27.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:1
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---AGGARKATTCAGGTAW
CTCATGAATATTCAT----
 A C G T A C G T A C G T G T C A A C T G C T A G C G T A C T A G C A T G C T G A A C G T A C G T T G A C C G T A C T A G C T A G G C A T G T C A C G A T
T A G C G A C T G A T C C G T A A C G T T C A G G T C A C G T A A C G T C G T A C G A T A C G T A G T C C G T A C G A T A C G T A C G T A C G T A C G T

HSF4/MA0771.1/Jaspar

Match Rank:2
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:AGGARKATTCAGGTAW
--GAANNTTCTAGAA-
 G T C A A C T G C T A G C G T A C T A G C A T G C T G A A C G T A C G T T G A C C G T A C T A G C T A G G C A T G T C A C G A T
A C G T A C G T T C A G G C T A G C T A A G T C T C A G C G A T C G A T T A G C A G C T T C G A A T C G G T C A G C T A A C G T

HSF1/MA0486.2/Jaspar

Match Rank:3
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:AGGARKATTCAGGTAW
--GAACGTTCTAGAA-
 G T C A A C T G C T A G C G T A C T A G C A T G C T G A A C G T A C G T T G A C C G T A C T A G C T A G G C A T G T C A C G A T
A C G T A C G T C T A G G C T A C G T A A G T C T C A G C G A T C A G T A G T C A C G T T C G A A C T G G T C A G C T A A C G T

PB0178.1_Sox8_2/Jaspar

Match Rank:4
Score:0.54
Offset:4
Orientation:forward strand
Alignment:AGGARKATTCAGGTAW--
----ACATTCATGACACG
 G T C A A C T G C T A G C G T A C T A G C A T G C T G A A C G T A C G T T G A C C G T A C T A G C T A G G C A T G T C A C G A T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:5
Score:0.54
Offset:0
Orientation:forward strand
Alignment:AGGARKATTCAGGTAW
AAGGKGRCGCAGGCA-
 G T C A A C T G C T A G C G T A C T A G C A T G C T G A A C G T A C G T T G A C C G T A C T A G C T A G G C A T G T C A C G A T
T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A A C G T

ZNF410/MA0752.1/Jaspar

Match Rank:6
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:AGGARKATTCAGGTAW---
--GANTATTATGGGATGGA
 G T C A A C T G C T A G C G T A C T A G C A T G C T G A A C G T A C G T T G A C C G T A C T A G C T A G G C A T G T C A C G A T A C G T A C G T A C G T
A C G T A C G T C A T G T C G A C A T G G A C T C T G A A G C T A C G T C T G A C A G T A T C G A C T G C A T G G T C A C G A T C T A G A C T G T G C A

HSF2/MA0770.1/Jaspar

Match Rank:7
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:AGGARKATTCAGGTAW
--GAANGTTCTAGAA-
 G T C A A C T G C T A G C G T A C T A G C A T G C T G A A C G T A C G T T G A C C G T A C T A G C T A G G C A T G T C A C G A T
A C G T A C G T T C A G C T G A G C T A G A T C T C A G G C A T C A G T G A T C A G C T T C G A A C T G G T C A G C T A A C G T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:8
Score:0.52
Offset:0
Orientation:forward strand
Alignment:AGGARKATTCAGGTAW
ATGAATATTC------
 G T C A A C T G C T A G C G T A C T A G C A T G C T G A A C G T A C G T T G A C C G T A C T A G C T A G G C A T G T C A C G A T
G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:9
Score:0.51
Offset:1
Orientation:forward strand
Alignment:AGGARKATTCAGGTAW
-GGTCANYTGAGGWCA
 G T C A A C T G C T A G C G T A C T A G C A T G C T G A A C G T A C G T T G A C C G T A C T A G C T A G G C A T G T C A C G A T
A C G T C T A G C A T G A C G T A G T C G C T A A G C T A G T C A G C T T C A G C T G A A C T G C A T G G C A T A T G C C G T A

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:10
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:AGGARKATTCAGGTAW
TAGAANVTTCTAGAA-
 G T C A A C T G C T A G C G T A C T A G C A T G C T G A A C G T A C G T T G A C C G T A C T A G C T A G G C A T G T C A C G A T
G A C T C T G A T C A G T G C A C G T A A T G C T A C G G A C T C A G T A G T C G A C T C T G A C A T G T C G A C T G A A C G T