Information for 2-TGCCCTTACA (Motif 8)

A C G T A C T G A G T C G A T C A G T C A C G T A C G T G T C A A T G C C G T A
Reverse Opposite:
A C G T A T C G C A G T G T C A C G T A A C T G C T A G A C T G A G T C G T C A
p-value:1e-11
log p-value:-2.658e+01
Information Content per bp:1.860
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.96%
Number of Background Sequences with motif65.5
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets50.7 +/- 28.2bp
Average Position of motif in Background47.3 +/- 22.1bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THAP1/MA0597.1/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-TGCCCTTACA
CTGCCCGCA--
 A C G T A C G T A C T G A G T C G A T C A G T C A C G T A C G T G T C A A T G C C G T A
A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TGCCCTTACA
GTGACCTT---
 A C G T A C G T A C T G A G T C G A T C A G T C A C G T A C G T G T C A A T G C C G T A
A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:3
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TGCCCTTACA
TGACCTYA--
 A C G T A C T G A G T C G A T C A G T C A C G T A C G T G T C A A T G C C G T A
A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:4
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----TGCCCTTACA-
GGGTGTGCCCAAAAGG
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C G A T C A G T C A C G T A C G T G T C A A T G C C G T A A C G T
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:5
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TGCCCTTACA
BNTGDCCTTG--
 A C G T A C G T A C G T A C T G A G T C G A T C A G T C A C G T A C G T G T C A A T G C C G T A
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:6
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TGCCCTTACA
-BCMATTAG-
 A C G T A C T G A G T C G A T C A G T C A C G T A C G T G T C A A T G C C G T A
A C G T A C T G A G T C G T C A G T C A A C G T A G C T C G T A T C A G A C G T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TGCCCTTACA
TKCTGTTCCA
 A C G T A C T G A G T C G A T C A G T C A C G T A C G T G T C A A T G C C G T A
A C G T C A G T T A G C A G C T T A C G C G A T A C G T A G T C G T A C G T C A

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TGCCCTTACA
CTGACCTTTG-
 A C G T A C G T A C T G A G T C G A T C A G T C A C G T A C G T G T C A A T G C C G T A
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T

ISL2/MA0914.1/Jaspar

Match Rank:9
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TGCCCTTACA
-GCACTTAA-
 A C G T A C T G A G T C G A T C A G T C A C G T A C G T G T C A A T G C C G T A
A C G T T A C G G A T C G C T A G T A C C G A T G A C T G C T A C T G A A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TGCCCTTACA
NTGACCTTGA-
 A C G T A C G T A C T G A G T C G A T C A G T C A C G T A C G T G T C A A T G C C G T A
C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A A C G T