Information for 3-AGTGAGCCCTAAC (Motif 6)

C G T A A T C G A C G T A C T G C G T A A C T G A T G C A G T C A G T C A C G T C T G A C T G A A G T C
Reverse Opposite:
A C T G A G C T G A C T G T C A A C T G C T A G A T C G A G T C A C G T A G T C C G T A A T G C A C G T
p-value:1e-12
log p-value:-2.767e+01
Information Content per bp:1.890
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets34.0 +/- 15.3bp
Average Position of motif in Background56.1 +/- 24.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.66
Offset:3
Orientation:forward strand
Alignment:AGTGAGCCCTAAC
---GAGSCCGAGC
 C G T A A T C G A C G T A C T G C G T A A C T G A T G C A G T C A G T C A C G T C T G A C T G A A G T C
A C G T A C G T A C G T A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C

PB0118.1_Esrra_2/Jaspar

Match Rank:2
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---AGTGAGCCCTAAC-
NNNNTTGACCCCTNNNN
 A C G T A C G T A C G T C G T A A T C G A C G T A C T G C G T A A C T G A T G C A G T C A G T C A C G T C T G A C T G A A G T C A C G T
C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C

PB0030.1_Hnf4a_1/Jaspar

Match Rank:3
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---AGTGAGCCCTAAC-
NNANTTGACCCCTNNNN
 A C G T A C G T A C G T C G T A A T C G A C G T A C T G C G T A A C T G A T G C A G T C A G T C A C G T C T G A C T G A A G T C A C G T
A C G T G T A C C G T A T C G A A C G T A C G T C T A G G T C A G T A C G T A C A G T C A G T C C A G T A C T G T C A G G T C A T A C G

PB0057.1_Rxra_1/Jaspar

Match Rank:4
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---AGTGAGCCCTAAC-
TGTCGTGACCCCTTAAT
 A C G T A C G T A C G T C G T A A T C G A C G T A C T G C G T A A C T G A T G C A G T C A G T C A C G T C T G A C T G A A G T C A C G T
C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.58
Offset:4
Orientation:forward strand
Alignment:AGTGAGCCCTAAC
----AGGCCTNG-
 C G T A A T C G A C G T A C T G C G T A A C T G A T G C A G T C A G T C A C G T C T G A C T G A A G T C
A C G T A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AGTGAGCCCTAAC
-GTGGGCCCCA--
 C G T A A T C G A C G T A C T G C G T A A C T G A T G C A G T C A G T C A C G T C T G A C T G A A G T C
A C G T T A C G G A C T A C T G A C T G C T A G A T G C A G T C A G T C A G T C C T G A A C G T A C G T

PAX1/MA0779.1/Jaspar

Match Rank:7
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---AGTGAGCCCTAAC-
NGCANTCATGCGTGACG
 A C G T A C G T A C G T C G T A A T C G A C G T A C T G C G T A A C T G A T G C A G T C A G T C A C G T C T G A C T G A A G T C A C G T
C A G T A C T G G T A C C T G A A T C G A G C T T A G C C T G A C G A T A T C G G A T C C T A G A C G T C T A G C G T A G T A C T A C G

PB0099.1_Zfp691_1/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--AGTGAGCCCTAAC--
NNNNTGAGCACTGTNNG
 A C G T A C G T C G T A A T C G A C G T A C T G C G T A A C T G A T G C A G T C A G T C A C G T C T G A C T G A A G T C A C G T A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:9
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--AGTGAGCCCTAAC
SCAGYCADGCATGAC
 A C G T A C G T C G T A A T C G A C G T A C T G C G T A A C T G A T G C A G T C A G T C A C G T C T G A C T G A A G T C
A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C

PAX9/MA0781.1/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---AGTGAGCCCTAAC-
TGCAGTCATGCGTGACG
 A C G T A C G T A C G T C G T A A T C G A C G T A C T G C G T A A C T G A T G C A G T C A G T C A C G T C T G A C T G A A G T C A C G T
C A G T A C T G G T A C C T G A A T C G A G C T A T G C C T G A C G A T A T C G A G T C C T A G A C G T C T A G C G T A G T A C T A C G